RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 MAP1LC3CQ9BXW4 147 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 HEYLQ9NQ87 328 aaPredicted RBP4.95□□□□□ -1.62
CHD2-202ENST00000420239 R4GN57 208 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.95□□□□□ -1.62
CHD2-202ENST00000420239 EPOPA6NHQ4 379 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 KLK10O43240 276 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 LIPFP07098 398 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 CRYBA4P53673 196 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 FOXF2Q12947 444 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 PRAMEF5Q5TYX0 476 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 C9orf135Q5VTT2 229 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 PRAMEF6Q5VXH4 476 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 MORN5Q5VZ52 161 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 TRAT1Q6PIZ9 186 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 VKORC1L1Q8N0U8 176 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 NABP2Q9BQ15 211 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 C1orf43Q9BWL3 253 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 OCIAD1Q9NX40 245 aa4.95□□□□□ -1.62
CHD2-202ENST00000420239 DIDO1Q9BTC0 2240 aaKnown RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 IGHV3-43A0A0B4J1X8 118 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 IGHV5-10-1A0A0J9YXX1 117 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 TMEM189A5PLL7 270 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 IGHV3-43DP0DP04 118 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 FCGR2BP31994 310 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 FOXG1P55316 489 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 CKS1BP61024 79 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 HBBP68871 147 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 NEU4Q8WWR8 484 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 ZNF48Q96MX3 618 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 AKIRIN1Q9H9L7 192 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 TCF19Q9Y242 345 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 KLF13Q9Y2Y9 288 aaPredicted RBP4.94□□□□□ -1.62
CHD2-202ENST00000420239 VCANP13611 3396 aa4.94□□□□□ -1.62
CHD2-202ENST00000420239 A0A1W2PQM1 296 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 PROP1O75360 226 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 TFF1P04155 84 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ADH4P08319 380 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FTH1P19P0C7X4 201 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ATP5IP56385 69 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 HOXA4Q00056 320 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 PLP2Q04941 152 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 TMEM200BQ69YZ2 307 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ADAMTSL5Q6ZMM2 481 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ACP7Q6ZNF0 438 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FOXI2Q6ZQN5 318 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ZNF788Q6ZQV5 615 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 MOB3BQ86TA1 216 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FAM90A1Q86YD7 464 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 OR2Z1Q8NG97 314 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 OR4A16Q8NH70 328 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 COQ2Q96H96 371 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 SPATA25Q9BR10 227 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 PLEKHA3Q9HB20 300 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ZNF257Q9Y2Q1 563 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 LOXL2Q9Y4K0 774 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 INSIG2Q9Y5U4 225 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ASCC3Q8N3C0 2202 aaKnown RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 IGKV1OR2-108A0A075B7D4 117 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 TRAV5A0A0B4J249 113 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 IGHV3-64DA0A0J9YX35 117 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 DEFB108AA8MXU0 73 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 C15orf65H3BRN8 121 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FCGR3BO75015 233 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 KLF7O75840 302 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 RNASE1P07998 156 aaKnown RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 MC5RP33032 325 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 KIR2DS2P43631 304 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FABP6P51161 128 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ZNF137PP52743 207 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 GUSBP1Q15486 140 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 CD300EQ496F6 205 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 TCTEX1D4Q5JR98 221 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 ZNF329Q86UD4 541 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 BOD1L2Q8IYS8 172 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FAM222BQ8WU58 562 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 BLNKQ8WV28 456 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 GTSF1Q8WW33 167 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 DPF1Q92782 380 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FAM167A-AS1Q96KT0 104 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 SLC25A2Q9BXI2 301 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 OBP2BQ9NPH6 170 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 SPANXB1Q9NS25 103 aaPredicted RBP4.93□□□□□ -1.62
CHD2-202ENST00000420239 HSPB8Q9UJY1 196 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 FREM1Q5H8C1 2179 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 GON4LQ3T8J9 2241 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 CHD9Q3L8U1 2897 aa4.93□□□□□ -1.62
CHD2-202ENST00000420239 LY6G6EA0A0G2JKS1 128 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 C15orf61A6NNL5 157 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 C2CD4DB7Z1M9 353 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 PEX7O00628 323 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 MGST3O14880 152 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 MT-CO3P00414 261 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 MYOD1P15172 320 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 TCTAP57738 103 aa4.92□□□□□ -1.62
CHD2-202ENST00000420239 TAS2R45P59539 299 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms