RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 A0A1W2PS18 150 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 DFFBO76075 338 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 IFNA10P01566 189 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 IGLC1P0CG04 106 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 VAMP1P23763 118 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 CRYBB3P26998 211 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 Q6ZWC4 215 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 KIR2DL5AQ8N109 375 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 GBGT1Q8N5D6 347 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 OR1S1Q8NH92 325 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 KIR2DL5BQ8NHK3 375 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 METTL26Q96S19 204 aa12.2□□□□□ -0.46
LINC00404-201ENST00000418660 TRAV2A0A0B4J234 112 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 PITX3O75364 302 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 SFT2D2O95562 160 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 SLC25A6P12236 298 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 OR10J1P30954 320 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 ATP5IP56385 69 aaPredicted RBP12.19□□□□□ -0.46
LINC00404-201ENST00000418660 YPEL3P61236 119 aaPredicted RBP12.19□□□□□ -0.46
LINC00404-201ENST00000418660 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
LINC00404-201ENST00000418660 APRG1Q8IVJ8 170 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 CENPSQ8N2Z9 138 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 Q8WTZ3 238 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 MS4A6AQ9H2W1 248 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 TP53TG1Q9Y2A0 90 aa12.19□□□□□ -0.46
LINC00404-201ENST00000418660 NAP1L6A6NFF2 107 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
LINC00404-201ENST00000418660 RPL35AP18077 110 aaKnown RBP12.18□□□□□ -0.46
LINC00404-201ENST00000418660 INPP1P49441 399 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 RPL11P62913 178 aaKnown RBP12.18□□□□□ -0.46
LINC00404-201ENST00000418660 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 BAK1Q16611 211 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 WFDC3Q8IUB2 231 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 STPG3Q8N7X2 389 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
LINC00404-201ENST00000418660 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 TMED3Q9Y3Q3 217 aa12.18□□□□□ -0.46
LINC00404-201ENST00000418660 SPRY2O43597 315 aa12.17□□□□□ -0.46
LINC00404-201ENST00000418660 UBE2MP61081 183 aaKnown RBP12.17□□□□□ -0.46
LINC00404-201ENST00000418660 ACY3Q96HD9 319 aa12.17□□□□□ -0.46
LINC00404-201ENST00000418660 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
LINC00404-201ENST00000418660 NDUFA13Q9P0J0 144 aa12.17□□□□□ -0.46
LINC00404-201ENST00000418660 FAM90A26D6RGX4 464 aa12.16□□□□□ -0.46
LINC00404-201ENST00000418660 IFNA4P05014 189 aa12.16□□□□□ -0.46
LINC00404-201ENST00000418660 P2RY1P47900 373 aa12.16□□□□□ -0.46
LINC00404-201ENST00000418660 ZNF124Q15973 351 aa12.16□□□□□ -0.46
LINC00404-201ENST00000418660 U3KQE9 123 aa12.16□□□□□ -0.46
LINC00404-201ENST00000418660 DNAH7Q8WXX0 4024 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 NDUFB6O95139 128 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 TOMM40O96008 361 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 RD3LP0DJH9 198 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 GPX4P36969 197 aaPredicted RBP12.15□□□□□ -0.46
LINC00404-201ENST00000418660 DEFB135Q30KP9 77 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 RNF183Q96D59 192 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 SDHCQ99643 169 aaPredicted RBP12.15□□□□□ -0.46
LINC00404-201ENST00000418660 RABAC1Q9UI14 185 aa12.15□□□□□ -0.46
LINC00404-201ENST00000418660 MED6O75586 246 aa12.14□□□□□ -0.47
LINC00404-201ENST00000418660 IL4P05112 153 aa12.14□□□□□ -0.47
LINC00404-201ENST00000418660 HNRNPCP07910 306 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC00404-201ENST00000418660 HOXB5P09067 269 aa12.14□□□□□ -0.47
LINC00404-201ENST00000418660 DEFB131AP59861 70 aa12.14□□□□□ -0.47
LINC00404-201ENST00000418660 CSTL1Q9H114 145 aa12.14□□□□□ -0.47
LINC00404-201ENST00000418660 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 HELTA6NFD8 242 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 CENPXA8MT69 81 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 MPTX1A8MV57 137 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 K7EQG2 157 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 IAPPP10997 89 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 PSG1P11464 419 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 EIF2B2P49770 351 aaKnown RBP12.13□□□□□ -0.47
LINC00404-201ENST00000418660 RAB11AP62491 216 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 GAMTQ14353 236 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 USF2Q15853 346 aaPredicted RBP12.13□□□□□ -0.47
LINC00404-201ENST00000418660 GGNBP1Q5YKI7 109 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 C16orf54Q6UWD8 224 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 FAM24BQ8N5W8 94 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 STXBP6Q8NFX7 210 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 SLC35E1Q96K37 410 aa12.13□□□□□ -0.47
LINC00404-201ENST00000418660 CIB3Q96Q77 187 aaPredicted RBP12.13□□□□□ -0.47
LINC00404-201ENST00000418660 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
LINC00404-201ENST00000418660 LCE6AA0A183 80 aa12.12□□□□□ -0.47
LINC00404-201ENST00000418660 LINC00854A0A1B0GVQ3 168 aa12.12□□□□□ -0.47
LINC00404-201ENST00000418660 SYNGR2O43760 224 aa12.12□□□□□ -0.47
LINC00404-201ENST00000418660 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
LINC00404-201ENST00000418660 GLMPQ8WWB7 406 aa12.12□□□□□ -0.47
LINC00404-201ENST00000418660 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
LINC00404-201ENST00000418660 A0A0J9YWU9 116 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 IL7P13232 177 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 RPP30P78346 268 aaKnown RBP12.11□□□□□ -0.47
LINC00404-201ENST00000418660 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 LYG2Q86SG7 212 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 OR51G1Q8NGK1 321 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 COQ8AQ8NI60 647 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 DCANP1Q8TF63 244 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 MAGT1Q9H0U3 335 aa12.11□□□□□ -0.47
LINC00404-201ENST00000418660 IGKV1D-37A0A075B6S9 117 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms