RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 C2orf83Q53S99 150 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 PRR30Q53SZ7 412 aaPredicted RBP9.61□□□□□ -0.87
LIMK1-202ENST00000418310 LINC00305Q7Z4B0 112 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 OR5B3Q8NH48 314 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF331Q9NQX6 463 aaPredicted RBP9.61□□□□□ -0.87
LIMK1-202ENST00000418310 Q9UFV3 132 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 M0QZ24 198 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 BMPR1BO00238 502 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 PAX1P15863 534 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 TNFRSF1AP19438 455 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 COX7A1P24310 79 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 GATA4P43694 442 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 MAJINQ3KP22 176 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 PATE2Q6UY27 113 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 TMEM136Q6ZRR5 245 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 NRN1Q9NPD7 142 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 CDC42EP3Q9UKI2 254 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 C16orf97H3BN30 126 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 NDUFB3O43676 98 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
LIMK1-202ENST00000418310 CX3CL1P78423 397 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 FAM167A-AS1Q96KT0 104 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 NDUFA4L2Q9NRX3 87 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF257Q9Y2Q1 563 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 S4R3C0 116 aa9.61□□□□□ -0.87
LIMK1-202ENST00000418310 BSNQ9UPA5 3926 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 SELENOTP62341 195 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 TCF24Q7RTU0 167 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 C1orf174Q8IYL3 243 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 RBM14Q96PK6 669 aaKnown RBP9.6□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF586Q9NXT0 402 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 BET1LQ9NYM9 111 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 A0A1W2PRD5 423 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 A0A1W2PRF3 423 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 A0A1W2PRM7 423 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 CGB1A6NKQ9 187 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 BRS3P32247 399 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF137PP52743 207 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
LIMK1-202ENST00000418310 PMCHL1Q16048 86 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 A0A1W2PPI3 338 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 PGPA6NDG6 321 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 APCSP02743 223 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 UBE2G1P62253 170 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 Q6ZS92 163 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 Q71RC1 249 aaPredicted RBP9.6□□□□□ -0.87
LIMK1-202ENST00000418310 OR4C13Q8NGP0 309 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 SFXN3Q9BWM7 321 aa9.6□□□□□ -0.87
LIMK1-202ENST00000418310 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 PPOXP50336 477 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 POU2AF1Q16633 256 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 TMEM183BQ1AE95 376 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 RNASEKQ6P5S7 137 aaKnown RBP9.59□□□□□ -0.87
LIMK1-202ENST00000418310 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 OSR1Q8TAX0 266 aaPredicted RBP9.59□□□□□ -0.87
LIMK1-202ENST00000418310 TRAV8-1A0A0A6YYK1 113 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 A0A1W2PS18 150 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 SH2D7A6NKC9 451 aaPredicted RBP9.59□□□□□ -0.87
LIMK1-202ENST00000418310 PEX7O00628 323 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 PRRG2O14669 202 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 GPX1P07203 203 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 FAM87AP0C7U9 286 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 LRRC10Q5BKY1 277 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 ZNF835Q9Y2P0 537 aa9.59□□□□□ -0.87
LIMK1-202ENST00000418310 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 AMY1AP04745 511 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 TDGF1P3P51864 188 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 NUDT10Q8NFP7 164 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 NUDT11Q96G61 164 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 IGF2BP2-AS1Q96M15 143 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 GNB1LQ9BYB4 327 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 TNFRSF19Q9NS68 423 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 PTPRQQ9UMZ3 2332 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 H0Y8G0 127 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 LY6HO94772 140 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 GFRALQ6UXV0 394 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 FAM57AQ8TBR7 257 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 OSTCQ9NRP0 149 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 TP73-AS1Q9UF72 201 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 A0A1W2PRE2 83 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 HIGD1CA8MV81 97 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 SPATA45Q537H7 98 aa9.58□□□□□ -0.88
LIMK1-202ENST00000418310 C22orf46C9J442 243 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 TMEM178BH3BS89 294 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 THBDP07204 575 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 LYZP61626 148 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 PLGLAQ15195 96 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 Q56UQ5 140 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
LIMK1-202ENST00000418310 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms