RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 LRTM2Q8N967 370 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 OR1S2Q8NGQ3 325 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 METTL26Q96S19 204 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 TMEM231Q9H6L2 316 aa11.59□□□□□ -0.55
ITGB1-204ENST00000417122 A0A1W2PS18 150 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 DFFBO76075 338 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 SFT2D2O95562 160 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 RPL11P62913 178 aaKnown RBP11.58□□□□□ -0.56
ITGB1-204ENST00000417122 PPP1R1AQ13522 171 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 BAK1Q16611 211 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 TRIQKQ629K1 86 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 APRG1Q8IVJ8 170 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 CENPSQ8N2Z9 138 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 OVOL2Q9BRP0 275 aa11.58□□□□□ -0.56
ITGB1-204ENST00000417122 NAP1L6A6NFF2 107 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 DNASE2O00115 360 aaPredicted RBP11.57□□□□□ -0.56
ITGB1-204ENST00000417122 PITX3O75364 302 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 RPL35AP18077 110 aaKnown RBP11.57□□□□□ -0.56
ITGB1-204ENST00000417122 CRYBB3P26998 211 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 OR10J1P30954 320 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 WFDC3Q8IUB2 231 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 Q8WTZ3 238 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 NPIPB3Q92617 1050 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 MS4A6AQ9H2W1 248 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 TMED3Q9Y3Q3 217 aa11.57□□□□□ -0.56
ITGB1-204ENST00000417122 KIR2DL5BA0A0G2JN68 375 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 KIR2DL5BA0A0G2JPC4 375 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 UBE2CO00762 179 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 SLC25A6P12236 298 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-204ENST00000417122 ZNF124Q15973 351 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 Q6ZWC4 215 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 KIR2DL5AQ8N109 375 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 KIR2DL5BQ8NHK3 375 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 ACY3Q96HD9 319 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 NARS2Q96I59 477 aaKnown RBP11.56□□□□□ -0.56
ITGB1-204ENST00000417122 SDHCQ99643 169 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-204ENST00000417122 MAP6D1Q9H9H5 199 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 NDUFA13Q9P0J0 144 aa11.56□□□□□ -0.56
ITGB1-204ENST00000417122 RYR3Q15413 4870 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 TRAV2A0A0B4J234 112 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 IFNA4P05014 189 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 P2RY1P47900 373 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 ATP5IP56385 69 aaPredicted RBP11.55□□□□□ -0.56
ITGB1-204ENST00000417122 UBE2MP61081 183 aaKnown RBP11.55□□□□□ -0.56
ITGB1-204ENST00000417122 STPG3Q8N7X2 389 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 IL17DQ8TAD2 202 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 TP53TG1Q9Y2A0 90 aa11.55□□□□□ -0.56
ITGB1-204ENST00000417122 LINC00854A0A1B0GVQ3 168 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 FAM90A26D6RGX4 464 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 SPRY2O43597 315 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 NDUFB6O95139 128 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 HNRNPCP07910 306 aaKnown RBP eCLIP11.54□□□□□ -0.566e-6■■■■□ 19.3
ITGB1-204ENST00000417122 HOXB5P09067 269 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 GRAMD2BQ96HH9 432 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 RABAC1Q9UI14 185 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 U3KQE9 123 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 STARD9Q9P2P6 4700 aa11.54□□□□□ -0.56
ITGB1-204ENST00000417122 NBEAL2Q6ZNJ1 2754 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 C9orf170A2RU37 121 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 CENPXA8MT69 81 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 MED6O75586 246 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 TOMM40O96008 361 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 IL4P05112 153 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 IAPPP10997 89 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
ITGB1-204ENST00000417122 RAB11AP62491 216 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 C7orf50Q9BRJ6 194 aaKnown RBP11.53□□□□□ -0.56
ITGB1-204ENST00000417122 FLVCR2Q9UPI3 526 aa11.53□□□□□ -0.56
ITGB1-204ENST00000417122 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 PSG1P11464 419 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 IL7P13232 177 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 DEFB131AP59861 70 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 GAMTQ14353 236 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
ITGB1-204ENST00000417122 GGNBP1Q5YKI7 109 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 FAM24BQ8N5W8 94 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 RNF183Q96D59 192 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 SLC35E1Q96K37 410 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 CSTL1Q9H114 145 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.57
ITGB1-204ENST00000417122 K7EQG2 157 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 SYNGR2O43760 224 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 BTCP35070 178 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 EIF2B2P49770 351 aaKnown RBP11.51□□□□□ -0.57
ITGB1-204ENST00000417122 LEMD1Q68G75 181 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 C16orf54Q6UWD8 224 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 GLMPQ8WWB7 406 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 CIB3Q96Q77 187 aaPredicted RBP11.51□□□□□ -0.57
ITGB1-204ENST00000417122 MAGT1Q9H0U3 335 aa11.51□□□□□ -0.57
ITGB1-204ENST00000417122 PAIP2BQ9ULR5 123 aaKnown RBP11.51□□□□□ -0.57
ITGB1-204ENST00000417122 HELTA6NFD8 242 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 ZFP92A6NM28 416 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 MPTX1A8MV57 137 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 WRBO00258 174 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 ADAP1O75689 374 aa11.5□□□□□ -0.57
ITGB1-204ENST00000417122 OR4E1P0C645 316 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms