RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 KLK5Q9Y337 293 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-208ENST00000416159 SULT1A3P0DMM9 295 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 SULT1A4P0DMN0 295 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 P2RY1P47900 373 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 Q8WTZ3 238 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 LINC00476Q8WZB0 136 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 SOSTQ9BQB4 213 aa12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 PLECQ15149 4684 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-208ENST00000416159 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 K7EQG2 157 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 TNFSF8P32971 234 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 RND2P52198 227 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 LEMD1Q68G75 181 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 STXBP6Q8NFX7 210 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 MCUBQ9NWR8 336 aa12.9□□□□□ -0.34
PDLIM2-208ENST00000416159 H3BMQ9 156 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 CA1P00915 261 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 NPY1RP25929 384 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 OR10J1P30954 320 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 CCR6P51684 374 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 RBMS2Q15434 407 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 NMSQ5H8A3 153 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 STHQ8IWL8 128 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 FAM24BQ8N5W8 94 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 OR11H2Q8NH07 326 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 U3KQE9 123 aa12.89□□□□□ -0.35
PDLIM2-208ENST00000416159 A0A0B4J2A0 478 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 ANXA3P12429 323 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 AKR1C4P17516 323 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 C11orf68Q9H3H3 251 aaKnown RBP12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 SHPKQ9UHJ6 478 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 U3KQ87 197 aa12.88□□□□□ -0.35
PDLIM2-208ENST00000416159 HYDINQ4G0P3 5121 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 AGRNO00468 2067 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 PIGBOS1A0A0B4J2F0 54 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 HELTA6NFD8 242 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 NXPH3O95157 252 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 LY6G6CO95867 125 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 IFNA10P01566 189 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 FAUP35544 74 aaKnown RBP12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 SRPXP78539 464 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 LGI3Q8N145 548 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 PHLDA1Q8WV24 401 aaPredicted RBP12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 PRR13Q9NZ81 148 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 ALMS1Q8TCU4 4167 aa12.87□□□□□ -0.35
PDLIM2-208ENST00000416159 SUPT4H1P63272 117 aaKnown RBP12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 C16orf54Q6UWD8 224 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 LYZL2Q7Z4W2 148 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 MFFQ9GZY8 342 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 HSPB7Q9UBY9 170 aa12.86□□□□□ -0.35
PDLIM2-208ENST00000416159 TOMM40O96008 361 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 ATP5IP56385 69 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 DHRS2Q13268 280 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 C11orf45Q8TAV5 145 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 DTD1Q8TEA8 209 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 GLMPQ8WWB7 406 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 ACY3Q96HD9 319 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 RBKSQ9H477 322 aa12.85□□□□□ -0.35
PDLIM2-208ENST00000416159 IL4P05112 153 aa12.84□□□□□ -0.35
PDLIM2-208ENST00000416159 RD3LP0DJH9 198 aa12.84□□□□□ -0.35
PDLIM2-208ENST00000416159 SPP1P10451 314 aa12.84□□□□□ -0.35
PDLIM2-208ENST00000416159 AP3S2P59780 193 aa12.84□□□□□ -0.35
PDLIM2-208ENST00000416159 OR1S1Q8NH92 325 aa12.84□□□□□ -0.35
PDLIM2-208ENST00000416159 BIRC6Q9NR09 4857 aa12.83□□□□□ -0.35
PDLIM2-208ENST00000416159 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 KNCNA6PVL3 124 aa12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 IFNA4P05014 189 aa12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 KLF9Q13886 244 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 USF2Q15853 346 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 PYDC2Q56P42 97 aa12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 TOMM5Q8N4H5 51 aa12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-208ENST00000416159 PSG1P11464 419 aa12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 GPX4P36969 197 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 NANOS2P60321 138 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 TMEM128Q5BJH2 165 aa12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 ACTL10Q5JWF8 245 aa12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 TRIM63Q969Q1 353 aa12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 EPPK1P58107 5090 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-208ENST00000416159 BUB3O43684 328 aa12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 GIG44P09565 113 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-208ENST00000416159 NUP62P37198 522 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms