RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 SLC35B1P78383 322 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 VMA21Q3ZAQ7 101 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 C1orf194Q5T5A4 169 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 AMMECR1Q9Y4X0 333 aaPredicted RBP12.76□□□□□ -0.37
HOXD3-202ENST00000410016 C22orf46C9J442 243 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
HOXD3-202ENST00000410016 TPPP2P59282 170 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 PRR30Q53SZ7 412 aaPredicted RBP12.76□□□□□ -0.37
HOXD3-202ENST00000410016 ZNF329Q86UD4 541 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 FAM168AQ92567 244 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 NAT8BQ9UHF3 227 aa12.76□□□□□ -0.37
HOXD3-202ENST00000410016 IGHV3-72A0A0B4J1Y9 119 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 MT-ND6P03923 174 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 MYCNOSP40205 109 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 MFAP2P55001 183 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 TCL1AP56279 114 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
HOXD3-202ENST00000410016 NHLRC2Q8NBF2 726 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 GNB4Q9HAV0 340 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 DYNLRB1Q9NP97 96 aa12.75□□□□□ -0.37
HOXD3-202ENST00000410016 WDR73Q6P4I2 378 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 BAGE2Q86Y30 109 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 SPTBN2O15020 2390 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 IGHV1-69-2A0A0G2JMI3 117 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
HOXD3-202ENST00000410016 CRYGBP07316 175 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 ASPHD1Q5U4P2 390 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 LINC00305Q7Z4B0 112 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 TEX45Q8NA69 505 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 NGBQ9NPG2 151 aa12.74□□□□□ -0.37
HOXD3-202ENST00000410016 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
HOXD3-202ENST00000410016 IGLV1-47P01700 117 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 DLX1P56177 255 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 RPL19P84098 196 aaKnown RBP12.73□□□□□ -0.37
HOXD3-202ENST00000410016 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 HCP5Q6MZN7 132 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 MBD6Q96DN6 1003 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 HSPB9Q9BQS6 159 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 CNTFRP26992 372 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 APOBEC3AP31941 199 aaPredicted RBP12.73□□□□□ -0.37
HOXD3-202ENST00000410016 NBL1P41271 181 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 COX19Q49B96 90 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 TNFRSF19Q9NS68 423 aa12.73□□□□□ -0.37
HOXD3-202ENST00000410016 POLEQ07864 2286 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 TRAV34A0A0B4J273 112 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 PEX7O00628 323 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 PLAUP00749 431 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 NUTF2P61970 127 aaKnown RBP12.72□□□□□ -0.37
HOXD3-202ENST00000410016 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 IGHV2-26A0A0B4J1V2 119 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 AMY1AP04745 511 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 TDRG1Q3Y452 100 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
HOXD3-202ENST00000410016 C19orf35Q6ZS72 473 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 TMEM116Q8NCL8 245 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 TNFRSF14Q92956 283 aa12.72□□□□□ -0.37
HOXD3-202ENST00000410016 IZUMO1RA6ND01 250 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 BMPR1BO00238 502 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 MOSP00540 346 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 GPX1P07203 203 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 TBR1Q16650 682 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 OR10J3Q5JRS4 329 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 ETFRF1Q6IPR1 90 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 ZNF841Q6ZN19 808 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 TRGV9Q99603 122 aa12.71□□□□□ -0.37
HOXD3-202ENST00000410016 SSBP3Q9BWW4 388 aaPredicted RBP12.71□□□□□ -0.37
HOXD3-202ENST00000410016 RALYQ9UKM9 306 aaKnown RBP12.71□□□□□ -0.37
HOXD3-202ENST00000410016 MALRD1Q5VYJ5 2156 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 ZZEF1O43149 2961 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 ORM2P19652 201 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 CDKN1AP38936 164 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 PRB3Q04118 309 aaPredicted RBP12.71□□□□□ -0.38
HOXD3-202ENST00000410016 TEX43Q6ZNM6 134 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 C7orf69Q9H7B7 122 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 SIGLEC9Q9Y336 463 aa12.71□□□□□ -0.38
HOXD3-202ENST00000410016 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 B9A039 149 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 HLA-DQA1P01909 254 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 RPL27AP46776 148 aaKnown RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 COMPP49747 757 aaPredicted RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 SPACA3Q8IXA5 215 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 NUDT10Q8NFP7 164 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 NUDT11Q96G61 164 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 RNF114Q9Y508 228 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.7□□□□□ -0.38
HOXD3-202ENST00000410016 LYNX1G3V0Z9 82 aa12.7□□□□□ -0.38
HOXD3-202ENST00000410016 APELAP0DMC3 54 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms