RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CLEC3BP05452 202 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 OR2F1Q13607 317 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 ZNF345Q14585 488 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 TMEM144Q7Z5S9 345 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 OR11H4Q8NGC9 324 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 OR5B12Q96R08 314 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 TMEM147Q9BVK8 224 aa12.75□□□□□ -0.37
TSPAN4-208ENST00000409531 A0A1W2PRX2 142 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 ANKRD34BA5PLL1 514 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 OR2T8A6NH00 312 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 NUPL2O15504 423 aaKnown RBP12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 GPR183P32249 361 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 ARL3P36405 182 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 AP2S1P53680 142 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 CD300CQ08708 224 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 VWC2Q2TAL6 325 aa12.74□□□□□ -0.37
TSPAN4-208ENST00000409531 A0A0D9SG52 128 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 TGOLN2O43493 480 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 HSPB1P04792 205 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 OR10J1P30954 320 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 CLINT1Q14677 625 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 TEPPQ6URK8 271 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 ATP5SQ99766 215 aa12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 MRPL36Q9P0J6 103 aaKnown RBP12.73□□□□□ -0.37
TSPAN4-208ENST00000409531 ZFP92A6NM28 416 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 F8W735 103 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 TAAR5O14804 337 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 GGCTO75223 188 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 FABP1P07148 127 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 ZP3P21754 424 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 RELQ04864 619 aaPredicted RBP12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 ZNF266Q14584 549 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 C18orf65Q6ZTR6 163 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 C8orf86Q6ZUL3 223 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 DPF1Q92782 380 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 FBXL17Q9UF56 701 aa12.72□□□□□ -0.37
TSPAN4-208ENST00000409531 UBE2L5PA0A1B0GUS4 154 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 LINC01619G3V211 115 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 MPDU1O75352 247 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 IFNA5P01569 189 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 CTSGP08311 255 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 IGLC1P0CG04 106 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 EIF2B2P49770 351 aaKnown RBP12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 ZNF616Q08AN1 781 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 RAB31Q13636 194 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 KCNRGQ8N5I3 272 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 THAP8Q8NA92 274 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 OR11H1Q8NG94 326 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 OR1N2Q8NGR9 330 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 SMIM3Q9BZL3 60 aa12.71□□□□□ -0.37
TSPAN4-208ENST00000409531 PPP5D1E7EU14 171 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 BMPR1BO00238 502 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 TRBV12-3P01733 135 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 YPEL3P61236 119 aaPredicted RBP12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 RPEL1Q2QD12 228 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 TRGV9Q99603 122 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
TSPAN4-208ENST00000409531 IGHV4OR15-8A0A075B7B6 117 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 A0A087WW49 117 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 BORCS7-ASMTA0A0B4J1R7 106 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 CCL24O00175 119 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 MYCNOSP40205 109 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 DEFB136Q30KP8 78 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 CHRDL1Q9BU40 450 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 PARD6GQ9BYG4 376 aaPredicted RBP12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 ARL6Q9H0F7 186 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 LSM4Q9Y4Z0 139 aaKnown RBP12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 NOTCH3Q9UM47 2321 aa12.69□□□□□ -0.38
TSPAN4-208ENST00000409531 TGP01266 2768 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 KANTRA0A1W2PQU2 76 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 IGKV1-17P01599 117 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 CXCL2P19875 107 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 C4BPBP20851 252 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 FGF7P21781 194 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 ADMP35318 185 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 SELENOTP62341 195 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 FHL3Q13643 280 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 TIGITQ495A1 244 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 FAM106AQ4KMX7 169 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 BTNL8Q6UX41 500 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 ZNF600Q6ZNG1 722 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 WFDC9Q8NEX5 89 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 ARPC5LQ9BPX5 153 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 NOTCH1P46531 2555 aa12.68□□□□□ -0.38
TSPAN4-208ENST00000409531 IGKV1D-37A0A075B6S9 117 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 NDUFA4O00483 81 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 JTBO76095 146 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 TOMM40O96008 361 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 CFDP00746 253 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 PF4P02776 101 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 RD3LP0DJH9 198 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 HOXD3P31249 432 aaPredicted RBP12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 TMUB2Q71RG4 321 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 GPHB5Q86YW7 130 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 Q8WTZ3 238 aa12.67□□□□□ -0.38
TSPAN4-208ENST00000409531 PPP1R14BQ96C90 147 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms