RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 TET1Q8NFU7 2136 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 SPTA1P02549 2419 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 MYLKQ15746 1914 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 CGB1A6NKQ9 187 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 K7EP13 123 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 SAA1P0DJI8 122 aaPredicted RBP14.66□□□□□ -0.06
SMPD4-202ENST00000409031 NTF4P34130 210 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 FANCMQ8IYD8 2048 aa14.66□□□□□ -0.06
SMPD4-202ENST00000409031 CSRP1P21291 193 aaKnown RBP14.66□□□□□ -0.06
SMPD4-202ENST00000409031 PSG3Q16557 428 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 ECSCRQ19T08 205 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 ZNF581Q9P0T4 197 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 PSG8Q9UQ74 426 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 FOXH1O75593 365 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 IGLL1P15814 213 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 FAM71F2Q6NXP2 309 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 SYT8Q8NBV8 401 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 DOCK9Q9BZ29 2069 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 IGKV3-7A0A075B6H7 116 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 MRPS18CQ9Y3D5 142 aaKnown RBP14.65□□□□□ -0.06
SMPD4-202ENST00000409031 ADAMTSL5Q6ZMM2 481 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 Q6ZT83 130 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 TDHQ8IZJ6 230 aa14.65□□□□□ -0.06
SMPD4-202ENST00000409031 SAA2-SAA4A0A096LPE2 208 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 SAA2P0DJI9 122 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-202ENST00000409031 ID1P41134 155 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 LOC105371242A0A075B767 164 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 PPIAL4CA0A0B4J2A2 164 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 C16orf97H3BN30 126 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 PPIAL4GP0DN37 164 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 CRIPAKQ8N1N5 446 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 AHRRA9YTQ3 701 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 SMAD7O15105 426 aaKnown RBP14.64□□□□□ -0.07
SMPD4-202ENST00000409031 CLPSP04118 112 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 PDLIM4P50479 330 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 SFTA2Q6UW10 78 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 FOXA2Q9Y261 457 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-202ENST00000409031 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 TRAV5A0A0B4J249 113 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 C9orf118A6NHY6 69 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 KHDC1LQ5JSQ8 128 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 VKORC1Q9BQB6 163 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 UBTD1Q9HAC8 227 aa14.64□□□□□ -0.07
SMPD4-202ENST00000409031 FABP5P3A8MUU1 101 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 F2RL2O00254 374 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 EFEMP2O95967 443 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 KLRB1Q12918 225 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 SHISA5Q8N114 240 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 FGFBP3Q8TAT2 258 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 IMMP1LQ96LU5 166 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 C5orf24Q7Z6I8 188 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 SMRP1Q8NCR6 262 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 LIME1Q9H400 295 aa14.63□□□□□ -0.07
SMPD4-202ENST00000409031 WIPF3A6NGB9 483 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 GFRA3O60609 400 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 TGFAP01135 160 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 SRSF1Q07955 248 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMPD4-202ENST00000409031 DOCK8Q8NF50 2099 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 LOXL3P58215 753 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 PRSS8Q16651 343 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 TMEM249Q2WGJ8 235 aa14.62□□□□□ -0.07
SMPD4-202ENST00000409031 MRPL20Q9BYC9 149 aaKnown RBP14.62□□□□□ -0.07
SMPD4-202ENST00000409031 KLF17Q5JT82 389 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-202ENST00000409031 SPINK8P0C7L1 97 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 KIR3DL3Q8N743 410 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 KIAA2026Q5HYC2 2103 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 FNDC10F2Z333 226 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 GLRXP35754 106 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 DLX4Q92988 240 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-202ENST00000409031 HES7Q9BYE0 225 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 TSC2P49815 1807 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 ZNF318Q5VUA4 2279 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 CCL25O15444 150 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 DNASE2BQ8WZ79 361 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 VWCEQ96DN2 955 aa14.61□□□□□ -0.07
SMPD4-202ENST00000409031 CRXO43186 299 aaPredicted RBP14.6□□□□□ -0.07
SMPD4-202ENST00000409031 SPANXA1Q9NS26 97 aa14.6□□□□□ -0.07
SMPD4-202ENST00000409031 IGKV1D-33P01593 117 aa14.6□□□□□ -0.07
SMPD4-202ENST00000409031 IGKV1-33P01594 117 aa14.6□□□□□ -0.07
SMPD4-202ENST00000409031 PPP1R32Q7Z5V6 425 aa14.6□□□□□ -0.07
SMPD4-202ENST00000409031 ASCL2Q99929 193 aa14.6□□□□□ -0.07
SMPD4-202ENST00000409031 PHF3Q92576 2039 aaKnown RBP14.6□□□□□ -0.07
SMPD4-202ENST00000409031 RPL15P61313 204 aaKnown RBP14.6□□□□□ -0.07
SMPD4-202ENST00000409031 IGHV2-70DA0A0C4DH43 119 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 D6R8Y8 96 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 TCRAP04437 139 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 ZNF815PA8K554 130 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 CECR9P0C854 216 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 FOXL2NBQ6ZUU3 175 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 ORMDL2Q53FV1 153 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 GTSCR1Q86UQ5 136 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 TNFRSF14Q92956 283 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 K7EP34 96 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 SS18L1O75177 396 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-202ENST00000409031 MRPL14Q6P1L8 145 aaKnown RBP14.59□□□□□ -0.07
SMPD4-202ENST00000409031 C8orf46Q8TAG6 207 aa14.59□□□□□ -0.07
SMPD4-202ENST00000409031 M0R381 172 aa14.58□□□□□ -0.07
SMPD4-202ENST00000409031 CEACAM8P31997 349 aaPredicted RBP14.58□□□□□ -0.07
SMPD4-202ENST00000409031 LINC00312Q9Y6C7 94 aa14.58□□□□□ -0.07
SMPD4-202ENST00000409031 V9GYV3 84 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms