RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FAM90A2PQ658T7 463 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 Q6ZRM9 215 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 LHFPL5Q8TAF8 219 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 DTD1Q8TEA8 209 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 GPR146Q96CH1 333 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 RNF183Q96D59 192 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 SOSTQ9BQB4 213 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 MAP6D1Q9H9H5 199 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 RYR2Q92736 4967 aa6.74□□□□□ -1.33
SNORD88A-201ENST00000408314 IGKV3-7A0A075B6H7 116 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 IGHV3OR16-13A0A075B7E8 117 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 IGHV3-74A0A0B4J1X5 117 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 NUPR2A6NF83 97 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 FAM90A26D6RGX4 464 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 MED6O75586 246 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 RPL35AP18077 110 aaKnown RBP6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 CRYBB3P26998 211 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 OR10J1P30954 320 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 RND2P52198 227 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 RPP30P78346 268 aaKnown RBP6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 KLF9Q13886 244 aaPredicted RBP6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 NMSQ5H8A3 153 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 PRSS54Q6PEW0 395 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 LYG2Q86SG7 212 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 OR1S1Q8NH92 325 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 ST8SIA2Q92186 375 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 MS4A6AQ9H2W1 248 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 FNDC4Q9H6D8 234 aaPredicted RBP6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 HSPB7Q9UBY9 170 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 RABAC1Q9UI14 185 aa6.73□□□□□ -1.33
SNORD88A-201ENST00000408314 CXorf65A6NEN9 183 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 IGKV1-17P01599 117 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 IFNA4P05014 189 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 HNRNPCP07910 306 aaKnown RBP eCLIP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 IGLC1P0CG04 106 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 SLC25A6P12236 298 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 VAMP1P23763 118 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 S100A7P31151 101 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 P2RY1P47900 373 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 UBE2MP61081 183 aaKnown RBP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 RAB11AP62491 216 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 RBMS2Q15434 407 aaKnown RBP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 TRIQKQ629K1 86 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 TMED4Q7Z7H5 227 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 STHQ8IWL8 128 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 GBGT1Q8N5D6 347 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 STXBP6Q8NFX7 210 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 TRIM63Q969Q1 353 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 ZNF414Q96IQ9 312 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 SLC35E1Q96K37 410 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 CIB3Q96Q77 187 aaPredicted RBP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 MFFQ9GZY8 342 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 KLK5Q9Y337 293 aaPredicted RBP6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 TMED3Q9Y3Q3 217 aa6.72□□□□□ -1.33
SNORD88A-201ENST00000408314 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.33
SNORD88A-201ENST00000408314 NAP1L6A6NFF2 107 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 TOMM40O96008 361 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 IL4P05112 153 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 RD3LP0DJH9 198 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 SPP1P10451 314 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 GPX4P36969 197 aaPredicted RBP6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 DEFB131AP59861 70 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 SNRPD3P62318 126 aaKnown RBP6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 SUPT4H1P63272 117 aaKnown RBP6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 TIGITQ495A1 244 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 LYZL2Q7Z4W2 148 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 APRG1Q8IVJ8 170 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 CENPSQ8N2Z9 138 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 LRTM2Q8N967 370 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 OR51G1Q8NGK1 321 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 ACY3Q96HD9 319 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 SEPSECSQ9HD40 501 aaKnown RBP6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 FBXL17Q9UF56 701 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 V9GYH0 126 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.34
SNORD88A-201ENST00000408314 IGHV3-66A0A0C4DH42 116 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 A0A0J9YWU9 116 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 ZFP92A6NM28 416 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 CENPXA8MT69 81 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 K7EQG2 157 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 NXPH3O95157 252 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 CFDP00746 253 aaPredicted RBP6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 CA1P00915 261 aaPredicted RBP6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 APOHP02749 345 aaPredicted RBP6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 DHRS2Q13268 280 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 CNPY1Q3B7I2 92 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 SAMD13Q5VXD3 122 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 OR8G2PQ6IF36 304 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 CCDC190Q86UF4 302 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 RARRES2Q99969 163 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 C11orf68Q9H3H3 251 aaKnown RBP6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 RBKSQ9H477 322 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 MRPL36Q9P0J6 103 aaKnown RBP6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
SNORD88A-201ENST00000408314 SFT2D2O95562 160 aa6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 NUTF2P61970 127 aaKnown RBP6.69□□□□□ -1.34
SNORD88A-201ENST00000408314 PMS2P11Q13670 270 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms