RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 SMG1Q96Q15 3661 aaKnown RBP12.69□□□□□ -0.38
TOM1-203ENST00000404284 A0A1W2PRE2 83 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 SNURFLB1AK76 121 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 INS-IGF2F8WCM5 200 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 TMEM200BQ69YZ2 307 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 OR2T6Q8NHC8 308 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 SLC25A2Q9BXI2 301 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 OSTCQ9NRP0 149 aa12.69□□□□□ -0.38
TOM1-203ENST00000404284 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
TOM1-203ENST00000404284 DPRXA6NFQ7 191 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 CGB1A6NKQ9 187 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 GPX1P07203 203 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 SSBP2P81877 361 aaPredicted RBP12.68□□□□□ -0.38
TOM1-203ENST00000404284 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
TOM1-203ENST00000404284 TRBV9A0A0B4J1U6 114 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 CX3CL1P78423 397 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 TIGITQ495A1 244 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 WFDC8Q8IUA0 241 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 GNB1LQ9BYB4 327 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 ZNF318Q5VUA4 2279 aa12.68□□□□□ -0.38
TOM1-203ENST00000404284 TRAV5A0A0B4J249 113 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 USF1P22415 310 aaPredicted RBP12.67□□□□□ -0.38
TOM1-203ENST00000404284 ERHP84090 104 aaKnown RBP12.67□□□□□ -0.38
TOM1-203ENST00000404284 WT1-ASQ06250 92 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 FXYD3Q14802 87 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 KLHDC1Q8N7A1 406 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 TMEM167AQ8TBQ9 72 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 FLYWCH2Q96CP2 140 aaKnown RBP12.67□□□□□ -0.38
TOM1-203ENST00000404284 FNDC4Q9H6D8 234 aaPredicted RBP12.67□□□□□ -0.38
TOM1-203ENST00000404284 Q9UFV3 132 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 MRPS16Q9Y3D3 137 aaKnown RBP12.67□□□□□ -0.38
TOM1-203ENST00000404284 ISLRO14498 428 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 PMCHP20382 165 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 AMTP48728 403 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 PPOXP50336 477 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 Q0VG73 95 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 C10orf55Q5SWW7 151 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 S100A7AQ86SG5 101 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 MEGF9Q9H1U4 602 aa12.67□□□□□ -0.38
TOM1-203ENST00000404284 ARFGEF3Q5TH69 2177 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 C16orf97H3BN30 126 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 TMEM178BH3BS89 294 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 ZNF253O75346 499 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 IGLV2-23P01705 113 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 THBDP07204 575 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
TOM1-203ENST00000404284 BSPH1Q075Z2 132 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 OR4C13Q8NGP0 309 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 SMIM12Q96EX1 92 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 SAP30LQ9HAJ7 183 aa12.66□□□□□ -0.38
TOM1-203ENST00000404284 NAV3Q8IVL0 2385 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 PPIAL4EA0A075B759 164 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 IGHV1-69-2A0A0G2JMI3 117 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 PPIAL4DF5H284 164 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 K7ERU9 68 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 PPIAL4FP0DN26 164 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 TMEM136Q6ZRR5 245 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 PDPNQ86YL7 162 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 OR4A5Q8NH83 315 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 ST6GALNAC6Q969X2 333 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 IGHV2-26A0A0B4J1V2 119 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
TOM1-203ENST00000404284 SPINK4O60575 86 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 RHOGP84095 191 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 Q5PR19 223 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 FAM71F2Q6NXP2 309 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 OR10X1Q8NGY0 326 aa12.65□□□□□ -0.38
TOM1-203ENST00000404284 H1FXQ92522 213 aaKnown RBP12.65□□□□□ -0.38
TOM1-203ENST00000404284 IGKV1D-37A0A075B6S9 117 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 MT-ND6P03923 174 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 TCL1AP56279 114 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
TOM1-203ENST00000404284 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 VSTM2AQ8TAG5 236 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 TNFRSF14Q92956 283 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 GNB4Q9HAV0 340 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 NAT8BQ9UHF3 227 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 SMIM27A0A1W2PRY6 76 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 C3orf79P0CE67 100 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 SLC35B1P78383 322 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 PATE2Q6UY27 113 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 ZNF355PQ9NSJ1 428 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 MRPL36Q9P0J6 103 aaKnown RBP12.64□□□□□ -0.39
TOM1-203ENST00000404284 CTSZQ9UBR2 303 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 CDC42EP3Q9UKI2 254 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 ROS1P08922 2347 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 CEP250Q9BV73 2442 aa12.64□□□□□ -0.39
TOM1-203ENST00000404284 PYYP10082 97 aa12.63□□□□□ -0.39
TOM1-203ENST00000404284 MGST1P10620 155 aaKnown RBP12.63□□□□□ -0.39
TOM1-203ENST00000404284 WDR73Q6P4I2 378 aa12.63□□□□□ -0.39
TOM1-203ENST00000404284 NIT1Q86X76 327 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms