RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 HIST1H2BLQ99880 126 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TIMM21Q9BVV7 248 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM133Q9H2Q1 129 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 PCTPQ9UKL6 214 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 NDUFAF1Q9Y375 327 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 MPDZO75970 2070 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 UHRF1BP1Q6BDS2 1440 aa1.55□□□□□ -2.16
HMGB1P17-201ENST00000403495 COL4A2P08572 1712 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 IGKV1-9A0A0C4DH69 117 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 MEIS3P1A6NDR6 274 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 ARRDC5A6NEK1 342 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 TMEM212A6NML5 194 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 TSTD3H0UI37 97 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 C19orf84I3L1E1 186 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 TAX1BP3O14907 124 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 TRGC1P0CF51 173 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 S100GP29377 79 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 RELAQ04206 551 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 KRTAP13-4Q3LI77 160 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 Q6ZTI0 123 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 AAED1Q7RTV5 226 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR5A1Q8NGJ0 315 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 PLEKHB2Q96CS7 222 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 SLAMF6Q96DU3 332 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 ADAT3Q96EY9 351 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR2J1Q9GZK6 312 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 MED11Q9P086 117 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 PRO2289Q9P1D8 64 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 SCAF11Q99590 1463 aaKnown RBP1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 SIPA1L1O43166 1804 aa1.54□□□□□ -2.16
HMGB1P17-201ENST00000403495 A0A0D9SG52 128 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 A0A1W2PRE2 83 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR51F1A6NGY5 319 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 ORC5O43913 435 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 GGCTO75223 188 aaKnown RBP1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 PGLYRP1O75594 196 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 HTR1AP08908 422 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 METTL15P1P0C7V9 234 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 CRYGAP11844 174 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 OGNP20774 298 aaKnown RBP1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 AQP4P55087 323 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 SLC38A11Q08AI6 406 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 RIC1Q4ADV7 1423 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 KIF24Q5T7B8 1368 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 LCN15Q6UWW0 184 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 CROCCP2Q86T23 111 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 WFDC11Q8NEX6 87 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR4E2Q8NGC2 313 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 OR10J5Q8NHC4 309 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 STAG3L4Q8TBR4 150 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 SPACA4Q8TDM5 124 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 DCANP1Q8TF63 244 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 C19orf12Q9NSK7 152 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 EPDR1Q9UM22 224 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 BAIAP2Q9UQB8 552 aa1.53□□□□□ -2.16
HMGB1P17-201ENST00000403495 WDR90Q96KV7 1748 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 MED1Q15648 1581 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 E7EQ34 232 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 PIAS1O75925 651 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 IFNA14P01570 189 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 CLPSP04118 112 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 COX6A1P12074 109 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 NFYBP25208 207 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 RNASE4P34096 147 aaKnown RBP1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 UBE2BP63146 152 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 LTC4SQ16873 150 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 SAMD13Q5VXD3 122 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 PHF13Q86YI8 300 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 IFT20Q8IY31 132 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 NUP35Q8NFH5 326 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 MBD3L1Q8WWY6 194 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 ZNF625Q96I27 306 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 YPEL2Q96QA6 119 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 CCDC32Q9BV29 185 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 SCN9AQ15858 1988 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 FBN1P35555 2871 aaKnown RBP1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 SLX4Q8IY92 1834 aa1.52□□□□□ -2.17
HMGB1P17-201ENST00000403495 RTEL1-TNFRSF6BF6WH68 1400 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 NCKAP5O14513 1909 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 IGLV3-9A0A075B6K5 115 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 TRGV10A0A0A0MS01 117 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 C7orf71A4D174 169 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 TMEM256-PLSCR3K7ERE1 68 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 M0R378 163 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 SDCBPO00560 298 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 PMP2P02689 132 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 TRGC2P03986 189 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 SHBGP04278 402 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 NBEAP1P0C6P0 100 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 NNATQ16517 81 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 TMEM128Q5BJH2 165 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 C22orf39Q6P5X5 142 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 DEFB128Q7Z7B8 93 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 DHFR2Q86XF0 187 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 OR8B3Q8NGG8 313 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 OR13D1Q8NGV5 346 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 OR2T10Q8NGZ9 312 aa1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 SKA2Q8WVK7 121 aaPredicted RBP1.51□□□□□ -2.17
HMGB1P17-201ENST00000403495 CANT1Q8WVQ1 401 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 1190.5 ms