RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 A0A1W2PN81 502 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 A0A1W2PRE2 83 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR7C2O60412 319 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 RPL8P62917 257 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 RPL19P84098 196 aaKnown RBP12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 MMD2Q8IY49 270 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TMEM256Q8N2U0 113 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 BEND2Q8NDZ0 799 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR1L6Q8NGR2 347 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 V9GYV3 84 aa12.82□□□□□ -0.36
CHRFAM7A-203ENST00000401522 VWC2LB2RUY7 222 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 C8orf88P0DMB2 117 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 USF1P22415 310 aaPredicted RBP12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CBLN1P23435 193 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CRYBB3P26998 211 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 RAB4BP61018 213 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TIGITQ495A1 244 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 C8orf31Q8N9H6 132 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR9G1Q8NH87 305 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 PIMREGQ9BSJ6 248 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 NDUFAF3Q9BU61 184 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 BPESC1Q9GZL8 116 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OSTCQ9NRP0 149 aa12.81□□□□□ -0.36
CHRFAM7A-203ENST00000401522 VSTM2AQ8TAG5 236 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 FLYWCH2Q96CP2 140 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 ESDP10768 282 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 PAFAH1B2P68402 229 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TMEM200BQ69YZ2 307 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 PDPNQ86YL7 162 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR10W1Q8NGF6 305 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 SLC25A33Q9BSK2 321 aa12.8□□□□□ -0.36
CHRFAM7A-203ENST00000401522 GGTLC3B5MD39 225 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CRISP2P16562 243 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CCL3L1P16619 93 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 GATA2P23769 480 aaPredicted RBP12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 COX19Q49B96 90 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 LYPD2Q6UXB3 125 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 LINC00311Q8N616 119 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 ZNF596Q8TC21 504 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 FOXC2Q99958 501 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 GNB1LQ9BYB4 327 aa12.79□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CSMD1Q96PZ7 3565 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 IGHV4-30-2A0A087WSY4 118 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 FCN1O00602 326 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TPPP2P59282 170 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR5I1Q13606 314 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 Q5PR19 223 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 WDR73Q6P4I2 378 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 ZNF600Q6ZNG1 722 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR10X1Q8NGY0 326 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 TMEM186Q96B77 213 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 NAGKQ9UJ70 344 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 PSMB11A5LHX3 300 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 ISLRO14498 428 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 NUPR1O60356 82 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 MT-ND6P03923 174 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 IER3P46695 156 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 RANP62826 216 aaKnown RBP12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 Q0VG73 95 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 MLANAQ16655 118 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 OR8I2Q8N0Y5 310 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 DNAJC4Q9NNZ3 241 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 CTSZQ9UBR2 303 aa12.78□□□□□ -0.36
CHRFAM7A-203ENST00000401522 GRIFINA4D1Z8 144 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 NDUFB3O43676 98 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SLC25A16P16260 332 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 LRRC10Q5BKY1 277 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR1L4Q8NGR5 311 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FAM167A-AS1Q96KT0 104 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SLC25A2Q9BXI2 301 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF430Q9H8G1 570 aaPredicted RBP12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TP53TG3Q9ULZ0 132 aa12.77□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SNURFLB1AK76 121 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 CX3CL1P78423 397 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 ZNF841Q6ZN19 808 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 OR2T6Q8NHC8 308 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 IGF2BP2-AS1Q96M15 143 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 WASHC3Q9Y3C0 194 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 VPS13CQ709C8 3753 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FLNBO75369 2602 aaKnown RBP12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 FCN3O75636 299 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 REG1BP48304 166 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 TAS2R60P59551 318 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 SSTP61278 116 aa12.76□□□□□ -0.37
CHRFAM7A-203ENST00000401522 UBE2L3P68036 154 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms