RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 DUX3Q96PT4 197 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 PRADC1Q9BSG0 188 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 CGB1A6NKQ9 187 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 IGLL1P15814 213 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 CCL1P22362 96 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.04□□□□□ -1.12
SMAD9-203ENST00000399275 TMEM92Q6UXU6 159 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 SH2D6Q7Z4S9 175 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 DEFB125Q8N687 156 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 PNRC2Q9NPJ4 139 aaKnown RBP8.04□□□□□ -1.12
SMAD9-203ENST00000399275 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 A4D1N5 150 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 SUPT4H1P63272 117 aaKnown RBP8.04□□□□□ -1.12
SMAD9-203ENST00000399275 GUSBP11Q6P575 273 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 TEX43Q6ZNM6 134 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 LINC00305Q7Z4B0 112 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF525Q8N782 197 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 TMEM54Q969K7 222 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 PIKFYVEQ9Y2I7 2098 aa8.04□□□□□ -1.12
SMAD9-203ENST00000399275 TCF15Q12870 199 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 RETNQ9HD89 108 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 WDR90Q96KV7 1748 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 TNS1Q9HBL0 1735 aaKnown RBP8.03□□□□□ -1.12
SMAD9-203ENST00000399275 ZNF638Q14966 1978 aaKnown RBP8.03□□□□□ -1.12
SMAD9-203ENST00000399275 DNAJC13O75165 2243 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 CABIN1Q9Y6J0 2220 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 ID1P41134 155 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 VDAC2P45880 294 aaPredicted RBP8.03□□□□□ -1.12
SMAD9-203ENST00000399275 FAM159AQ6UWV7 190 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 HAPLN4Q86UW8 402 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 hCG_38984A0A1B0GV85 526 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 DAD1P61803 113 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 KLRD1Q13241 179 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 CDPF1Q6NVV7 123 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 Q6ZWC4 215 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 BMPERQ8N8U9 685 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 NTN5Q8WTR8 489 aaPredicted RBP8.03□□□□□ -1.12
SMAD9-203ENST00000399275 MCRIP2Q9BUT9 160 aaKnown RBP8.03□□□□□ -1.12
SMAD9-203ENST00000399275 C1QTNF5Q9BXJ0 243 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 DEFB127Q9H1M4 99 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 PROCRQ9UNN8 238 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 J3QW42 95 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 IGHG4P01861 327 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 PRDM14Q9GZV8 571 aa8.03□□□□□ -1.12
SMAD9-203ENST00000399275 KIR2DL5BA0A0G2JN68 375 aa8.02□□□□□ -1.12
SMAD9-203ENST00000399275 KIR2DL5BA0A0G2JPC4 375 aa8.02□□□□□ -1.12
SMAD9-203ENST00000399275 NBEAP1P0C6P0 100 aa8.02□□□□□ -1.12
SMAD9-203ENST00000399275 KIR2DL5AQ8N109 375 aa8.02□□□□□ -1.12
SMAD9-203ENST00000399275 OR11H6Q8NGC7 330 aa8.02□□□□□ -1.12
SMAD9-203ENST00000399275 M0R381 172 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 APELAP0DMC3 54 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 COX8AP10176 69 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 GNB2P62879 340 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 SS18L1O75177 396 aaPredicted RBP8.02□□□□□ -1.13
SMAD9-203ENST00000399275 CEACAM4O75871 244 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 ID3Q02535 119 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 TFF3Q07654 80 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 GPHA2Q96T91 129 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 A0A0A6YYD4 124 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 M0QXV9 152 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 NPFFO15130 113 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 CRPP02741 224 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 IFI27P40305 119 aaPredicted RBP8.02□□□□□ -1.13
SMAD9-203ENST00000399275 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 FOXC1Q12948 553 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 ARTNQ5T4W7 220 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 UNQ6494/PRO21346Q6UXR6 183 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 AGMATQ9BSE5 352 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 A0A1B0GX51 115 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 DUTP33316 252 aaKnown RBP8.02□□□□□ -1.13
SMAD9-203ENST00000399275 DUSP15Q9H1R2 295 aaPredicted RBP8.02□□□□□ -1.13
SMAD9-203ENST00000399275 DLL3Q9NYJ7 618 aa8.02□□□□□ -1.13
SMAD9-203ENST00000399275 TRPM6Q9BX84 2022 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 IGHV1-24A0A0C4DH33 117 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 ABHD12Q8N2K0 398 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 SIGLEC12Q96PQ1 595 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 ZNHIT1O43257 154 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 GFRA3O60609 400 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 CTSBP07858 339 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 HAMPP81172 84 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 SARAFQ96BY9 339 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 PLEKHB2Q96CS7 222 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 ASCL2Q99929 193 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 SBF1O95248 1867 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 SCN3AQ9NY46 2000 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 IGKV1D-43A0A0B4J1Z2 117 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 TMEM74BQ9NUR3 256 aa8.01□□□□□ -1.13
SMAD9-203ENST00000399275 DOCK9Q9BZ29 2069 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 TMPRSS2O15393 492 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 SPRY3O43610 288 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 ACYP1P07311 99 aa8□□□□□ -1.13
SMAD9-203ENST00000399275 CCL3P10147 92 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms