RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ODF3BA8MYP8 253 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 GCGP01275 180 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 FABP4P15090 132 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 TAS2R60P59551 318 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 PLP1P60201 277 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 TIGITQ495A1 244 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 CFHR4Q92496 578 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 FXYD5Q96DB9 178 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 PERPQ96FX8 193 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 TRAPPC1Q9Y5R8 145 aa13.4□□□□□ -0.26
NUP50-202ENST00000396096 TIMM23O14925 209 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 PRTN3P24158 256 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 CEACAM3P40198 252 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 C1orf122Q6ZSJ8 110 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 LINC00305Q7Z4B0 112 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 PRORYQ9H606 182 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 DMRT1Q9Y5R6 373 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 ABCA4P78363 2273 aa13.39□□□□□ -0.27
NUP50-202ENST00000396096 MOSP00540 346 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 PYYP10082 97 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 MYCNOSP40205 109 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 LGALS4P56470 323 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 ARF6P62330 175 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
NUP50-202ENST00000396096 CDC42EP3Q9UKI2 254 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 SLC17A3O00476 420 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 FCN1O00602 326 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 ISLRO14498 428 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
NUP50-202ENST00000396096 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 RPEL1Q2QD12 228 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 C19orf35Q6ZS72 473 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 ZNF329Q86UD4 541 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 KIR3DL3Q8N743 410 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 NPBQ8NG41 125 aa13.38□□□□□ -0.27
NUP50-202ENST00000396096 NDUFA3O95167 84 aa13.37□□□□□ -0.27
NUP50-202ENST00000396096 CTAG1AP78358 180 aa13.37□□□□□ -0.27
NUP50-202ENST00000396096 OR5I1Q13606 314 aa13.37□□□□□ -0.27
NUP50-202ENST00000396096 I3L2K1 104 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 NBR2O15453 112 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 HYPMO75409 117 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 AMBPP02760 352 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 TPRP12270 2363 aaKnown RBP13.36□□□□□ -0.27
NUP50-202ENST00000396096 APELAP0DMC3 54 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 PLGLAQ15195 96 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 OR1B1Q8NGR6 318 aa13.36□□□□□ -0.27
NUP50-202ENST00000396096 PEX7O00628 323 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 IGLC1P0CG04 106 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 ORM2P19652 201 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 LY6DQ14210 128 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 MMDQ15546 238 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 ATRXP46100 2492 aa13.35□□□□□ -0.27
NUP50-202ENST00000396096 A0A1W2PPR1 153 aa13.34□□□□□ -0.27
NUP50-202ENST00000396096 A6NNC1 897 aa13.34□□□□□ -0.27
NUP50-202ENST00000396096 GPR6P46095 362 aaPredicted RBP13.34□□□□□ -0.27
NUP50-202ENST00000396096 OR1L6Q8NGR2 347 aa13.34□□□□□ -0.27
NUP50-202ENST00000396096 TRBV9A0A0B4J1U6 114 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 OOSP1A8MZH6 123 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 LINC00587B1AMM8 73 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 HIST1H1BP16401 226 aaKnown RBP13.33□□□□□ -0.27
NUP50-202ENST00000396096 KLRD1Q13241 179 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 WNT10AQ9GZT5 417 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 HILPDAQ9Y5L2 63 aa13.33□□□□□ -0.27
NUP50-202ENST00000396096 IGHV3-21A0A0B4J1V1 117 aa13.33□□□□□ -0.28
NUP50-202ENST00000396096 GP9P14770 177 aa13.33□□□□□ -0.28
NUP50-202ENST00000396096 FAM231DQ6ZW35 169 aa13.33□□□□□ -0.28
NUP50-202ENST00000396096 LHFPL4Q7Z7J7 247 aa13.33□□□□□ -0.28
NUP50-202ENST00000396096 RNASE7Q9H1E1 156 aaKnown RBP13.33□□□□□ -0.28
NUP50-202ENST00000396096 CNIH1O95406 144 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 ADMP35318 185 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 CX3CL1P78423 397 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 RPL19P84098 196 aaKnown RBP13.32□□□□□ -0.28
NUP50-202ENST00000396096 COX19Q49B96 90 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 IBA57Q5T440 356 aaKnown RBP13.32□□□□□ -0.28
NUP50-202ENST00000396096 CDPF1Q6NVV7 123 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 OR5R1Q8NH85 324 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 ARHGAP32A7KAX9 2087 aa13.32□□□□□ -0.28
NUP50-202ENST00000396096 SMIM27A0A1W2PRY6 76 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 K7EIM0 57 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 NBEAP1P0C6P0 100 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 JOSD1Q15040 202 aaPredicted RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 TMEM183BQ1AE95 376 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 MINOS1Q5TGZ0 78 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 CCDC144NLQ6NUI1 221 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 OR8I2Q8N0Y5 310 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 GBGT1Q8N5D6 347 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 GNB1LQ9BYB4 327 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 EPDR1Q9UM22 224 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 HIGD1AQ9Y241 93 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 KLF12Q9Y4X4 402 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 MINOS1-NBL1R4GNA1 71 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 SPTBN4Q9H254 2564 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
NUP50-202ENST00000396096 PSG1P11464 419 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 CBLN1P23435 193 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 EBI3Q14213 229 aa13.31□□□□□ -0.28
NUP50-202ENST00000396096 VMO1Q7Z5L0 202 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms