RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 C5orf47Q569G3 176 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 CLDND2Q8NHS1 167 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 S4R3C0 116 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 H0YIZ8 118 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 ID1P41134 155 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 SRSF9Q13242 221 aaKnown RBP eCLIP12.11□□□□□ -0.47
VSIR-201ENST00000394957 ZNF146Q15072 292 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 MPV17L2Q567V2 206 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 PAQR4Q8N4S7 273 aaPredicted RBP12.11□□□□□ -0.47
VSIR-201ENST00000394957 FGFBP3Q8TAT2 258 aa12.11□□□□□ -0.47
VSIR-201ENST00000394957 IGKV1D-13A0A0B4J2D9 117 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 IGKV1-13P0DP09 117 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 SRSF12Q8WXF0 261 aaKnown RBP12.1□□□□□ -0.47
VSIR-201ENST00000394957 RAB37Q96AX2 223 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 IGHV2-26A0A0B4J1V2 119 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 C17orf100A8MU93 164 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 SAP30O75446 220 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 PTPRQQ9UMZ3 2332 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 SCN8AQ9UQD0 1980 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 TFF1P04155 84 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 GCHFRP30047 84 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 GPR183P32249 361 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 CKS2P33552 79 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 PCSK4Q6UW60 755 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 GFI1Q99684 422 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 IQCF6A8MYZ5 107 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 IL4P05112 153 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
VSIR-201ENST00000394957 FOXF2Q12947 444 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 TMEM136Q6ZRR5 245 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 GOLT1AQ6ZVE7 132 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 KCNS1Q96KK3 526 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 OR10J6PQ8NGY7 276 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 KIF26AQ9ULI4 1882 aaPredicted RBP12.09□□□□□ -0.47
VSIR-201ENST00000394957 TRAV9-1A0A075B6T8 112 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 CRYGCP07315 174 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 FAM168AQ92567 244 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 NPCDR1Q9BY65 106 aa12.09□□□□□ -0.47
VSIR-201ENST00000394957 SNCGO76070 127 aa12.08□□□□□ -0.47
VSIR-201ENST00000394957 IGKV3-15P01624 115 aa12.08□□□□□ -0.47
VSIR-201ENST00000394957 SMIM13P0DJ93 91 aa12.08□□□□□ -0.47
VSIR-201ENST00000394957 NMUP48645 174 aa12.08□□□□□ -0.47
VSIR-201ENST00000394957 B3GALT5-AS1P59052 145 aa12.08□□□□□ -0.47
VSIR-201ENST00000394957 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 SRIP30626 198 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 PRB3Q04118 309 aaPredicted RBP12.08□□□□□ -0.48
VSIR-201ENST00000394957 TFF3Q07654 80 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 GCSAMLQ5JQS6 135 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 IGHV3-49A0A0A0MS15 119 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 NPIPB11E5RHQ5 1161 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 HERVK_113P61574 105 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 B5MCH6 92 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 CCL3L1P16619 93 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 PSMB2P49721 201 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 RHOGP84095 191 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 POU2AF1Q16633 256 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 FAM90A1Q86YD7 464 aa12.08□□□□□ -0.48
VSIR-201ENST00000394957 ACACBO00763 2458 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 KBTBD11-OT1A0A1B0GTJ5 212 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 IGLC7A0M8Q6 106 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 DLX1P56177 255 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 COL4A4P53420 1690 aaPredicted RBP12.07□□□□□ -0.48
VSIR-201ENST00000394957 A0A1W2PS18 150 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 IGFBP2P18065 325 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
VSIR-201ENST00000394957 GATA2P23769 480 aaPredicted RBP12.07□□□□□ -0.48
VSIR-201ENST00000394957 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 LINC00305Q7Z4B0 112 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 ZNF502Q8TBZ5 544 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 FBLN5Q9UBX5 448 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 LYL1P12980 280 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 C2orf83Q53S99 150 aa12.07□□□□□ -0.48
VSIR-201ENST00000394957 MRPL27Q9P0M9 148 aaKnown RBP12.07□□□□□ -0.48
VSIR-201ENST00000394957 LRRK1Q38SD2 2015 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 A0A0G2JNJ9 132 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 CGAP01215 116 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 C20orf204Q6ZNR8 217 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 LYPD6BQ8NI32 183 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 DPM3Q9P2X0 92 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 Q9UFV3 132 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 PGPEP1LA6NFU8 196 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 OR4C46A6NHA9 309 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 SSBP2P81877 361 aaPredicted RBP12.06□□□□□ -0.48
VSIR-201ENST00000394957 OTOGLQ3ZCN5 2332 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 LEPROTL1O95214 131 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 TMEM70Q9BUB7 260 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
VSIR-201ENST00000394957 IGHV3OR16-12A0A075B7B8 117 aa12.05□□□□□ -0.48
VSIR-201ENST00000394957 IGHV1-18A0A0C4DH31 117 aa12.05□□□□□ -0.48
VSIR-201ENST00000394957 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms