RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SLAQ13239 276 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 GFRALQ6UXV0 394 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 TSKUQ8WUA8 353 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 TMEM68Q96MH6 324 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 ZNF355PQ9NSJ1 428 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 AMMECR1Q9Y4X0 333 aaPredicted RBP14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 CGB1A6NKQ9 187 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 C3orf79P0CE67 100 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 TNFSF4P23510 183 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 PATE2Q6UY27 113 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 ZNF329Q86UD4 541 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 FAM19A2Q8N3H0 131 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 FNDC4Q9H6D8 234 aaPredicted RBP14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 LPAR2Q9HBW0 351 aa14.82□□□□□ -0.04
PCDHA1-202ENST00000394633 COX7A2P2O60397 106 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 CCL3L1P16619 93 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 REG1BP48304 166 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 BATFQ16520 125 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 SPATA45Q537H7 98 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 TMEM177Q53S58 311 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 OR5AN1Q8NGI8 311 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 PAXXQ9BUH6 204 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 ZNF331Q9NQX6 463 aaPredicted RBP14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 TRAV34A0A0B4J273 112 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 INS-IGF2F8WCM5 200 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 REG1AP05451 166 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 WT1-ASQ06250 92 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 C10orf55Q5SWW7 151 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 C10orf113Q5VZT2 155 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 FAM231DQ6ZW35 169 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 C18orf32Q8TCD1 76 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 WIPF2Q8TF74 440 aaPredicted RBP14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 USP24Q9UPU5 2620 aa14.81□□□□□ -0.04
PCDHA1-202ENST00000394633 IGKV1D-37A0A075B6S9 117 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 PEX7O00628 323 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 FCN3O75636 299 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 GDF5OSQ5U4N7 250 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 GAL3ST2Q9H3Q3 398 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 ZNF430Q9H8G1 570 aaPredicted RBP14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 NAV3Q8IVL0 2385 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 FSTL3O95633 263 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 CD40P25942 277 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 PRRX1P54821 245 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 FAM27E3Q08E93 113 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 TMEM167AQ8TBQ9 72 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 NPIPB3Q92617 1050 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 FLYWCH2Q96CP2 140 aaKnown RBP14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 PRORYQ9H606 182 aa14.8□□□□□ -0.04
PCDHA1-202ENST00000394633 A0A1W2PN81 502 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 NKX6-3A6NJ46 265 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 CCL8P80075 99 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 LY6DQ14210 128 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 CYB5R2Q6BCY4 276 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 NUDT10Q8NFP7 164 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 OR1L4Q8NGR5 311 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 FXYD5Q96DB9 178 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 NUDT11Q96G61 164 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 MRPL36Q9P0J6 103 aaKnown RBP14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 CFAP46Q8IYW2 2715 aa14.79□□□□□ -0.04
PCDHA1-202ENST00000394633 TCRBV4S1A1TA0A5B7 111 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 PRRG2O14669 202 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 NPSP0C0P6 89 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 GAGE1Q13065 139 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 DIAPH2-AS1Q14236 149 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 RASL11AQ6T310 242 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 NUP35Q8NFH5 326 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 GRAMD2BQ96HH9 432 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 MRPL27Q9P0M9 148 aaKnown RBP14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 IGSF10Q6WRI0 2623 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 NTF3P20783 257 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 CEACAM8P31997 349 aaPredicted RBP14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 MFAP2P55001 183 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 MEF2CQ06413 473 aaPredicted RBP14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 ZNF835Q9Y2P0 537 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 GOLT1BQ9Y3E0 138 aa14.78□□□□□ -0.04
PCDHA1-202ENST00000394633 DPRXA6NFQ7 191 aa14.77□□□□□ -0.04
PCDHA1-202ENST00000394633 C19orf35Q6ZS72 473 aa14.77□□□□□ -0.04
PCDHA1-202ENST00000394633 THAP8Q8NA92 274 aa14.77□□□□□ -0.04
PCDHA1-202ENST00000394633 WNT10AQ9GZT5 417 aa14.77□□□□□ -0.04
PCDHA1-202ENST00000394633 IGLC2P0DOY2 106 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 IGLC3P0DOY3 106 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 BPIFB3P59826 476 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 GNG5P63218 68 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 TMEM200BQ69YZ2 307 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 ZNF841Q6ZN19 808 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 ZCCHC24Q8N2G6 241 aaKnown RBP14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 OR4C13Q8NGP0 309 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 C7orf69Q9H7B7 122 aa14.77□□□□□ -0.05
PCDHA1-202ENST00000394633 A0A0G2JNJ9 132 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 HYPMO75409 117 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 IGLV2-23P01705 113 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 TFPI2P48307 235 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 KLRB1Q12918 225 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 PRR27Q6MZM9 219 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 OR4A5Q8NH83 315 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 UQCR10Q9UDW1 63 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 Q9UFV3 132 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 CORTO00230 105 aa14.76□□□□□ -0.05
PCDHA1-202ENST00000394633 PLAUP00749 431 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms