RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 LOC389332A0A1B0GUA5 103 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 FAM90A26D6RGX4 464 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 GCHFRP30047 84 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.65
RFFL-202ENST00000394597 TEPPQ6URK8 271 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 STPG3Q8N7X2 389 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 RPEQ96AT9 228 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 MRAP2Q96G30 205 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 AP5S1Q9NUS5 200 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 CALYQ9NYX4 217 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 ANAPC10Q9UM13 185 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 SSUH2Q9Y2M2 353 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 AMMECR1Q9Y4X0 333 aaPredicted RBP4.71□□□□□ -1.65
RFFL-202ENST00000394597 CHD7Q9P2D1 2997 aa4.71□□□□□ -1.65
RFFL-202ENST00000394597 MED13Q9UHV7 2174 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 PTPRQQ9UMZ3 2332 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 SPG11Q96JI7 2443 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 GAGE12HA6NDE8 117 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 F2Z2F3 143 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 NDUFB8O95169 186 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 COX7A1P24310 79 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 COL8A1P27658 744 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 CEACAM3P40198 252 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 WDR82Q6UXN9 313 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 ASCL4Q6XD76 172 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.66
RFFL-202ENST00000394597 ZNF714Q96N38 554 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 DOCK7Q96N67 2140 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 K7EM74 188 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 TM4SF5O14894 197 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 SPINK8P0C7L1 97 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 CRYBA4P53673 196 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 KIR3DS1Q14943 382 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 ADAMTSL5Q6ZMM2 481 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 RPRMLQ8N4K4 120 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 ZNF645Q8N7E2 425 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 TMEM116Q8NCL8 245 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 ZNRF1Q8ND25 227 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 MS4A6AQ9H2W1 248 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
RFFL-202ENST00000394597 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
RFFL-202ENST00000394597 TRAV24A0A0B4J272 114 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 TMEM8BA6NDV4 472 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SLAQ13239 276 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 PSG3Q16557 428 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 CD300EQ496F6 205 aaPredicted RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 TMEM177Q53S58 311 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SCRT1Q9BWW7 348 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 IDI2-AS1Q9NZ38 188 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 JPT1Q9UK76 154 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 NUP210LQ5VU65 1888 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 IZUMO1RA6ND01 250 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 WIPF3A6NGB9 483 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 IGLV3-1P01715 115 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 RPL15P61313 204 aaKnown RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 Q1RN00 199 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 PRR30Q53SZ7 412 aaPredicted RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 DEFB125Q8N687 156 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 PGLYRP4Q96LB8 373 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 HIST1H4GQ99525 98 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 FAM215AQ9Y5M1 114 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 WNK1Q9H4A3 2382 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 ACACBO00763 2458 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 IGKV1D-13A0A0B4J2D9 117 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 ZNF503-AS2A6NEH8 195 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 C22orf46C9J442 243 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 C12orf77C9JDV5 145 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SNCGO76070 127 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 APOMO95445 188 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 TMEM50AO95807 157 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 CGAP01215 116 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 IGKV1-13P0DP09 117 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
RFFL-202ENST00000394597 ZNF726P1Q15940 193 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 TMEM249Q2WGJ8 235 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 TMEM30BQ3MIR4 351 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 KHDC1LQ5JSQ8 128 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 FAM201AQ5SY85 155 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 MCRIP2Q9BUT9 160 aaKnown RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 SS18L2Q9UHA2 77 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SOX21Q9Y651 276 aaPredicted RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 PCNX3Q9H6A9 2034 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 A0A1W2PRE2 83 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SCGB1A1P11684 91 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 HBBP68871 147 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 RIGQ13278 110 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 ZNF146Q15072 292 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 C3orf36Q3SXR2 165 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 MORN2Q502X0 79 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 GCSAMLQ5JQS6 135 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 SCGB1D4Q6XE38 83 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 OR4X2Q8NGF9 303 aa4.7□□□□□ -1.66
RFFL-202ENST00000394597 ZNF418Q8TF45 676 aaPredicted RBP4.7□□□□□ -1.66
RFFL-202ENST00000394597 TRAV8-6A0A0B4J262 113 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 C9orf118A6NHY6 69 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 SYS1-DBNDD2H3BUS1 97 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 RRHO14718 337 aa4.69□□□□□ -1.66
RFFL-202ENST00000394597 OR2J3O76001 311 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms