RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 MAP1LC3AQ9H492 121 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 PRTFDC1Q9NRG1 225 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 AGPAT3Q9NRZ7 376 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 HSPB8Q9UJY1 196 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 KIF13BQ9NQT8 1826 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 SCN10AQ9Y5Y9 1956 aa-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 MYO18AQ92614 2054 aaKnown RBP-0.23□□□□□ -2.45
SNORD28B-201ENST00000390993 ZDBF2Q9HCK1 2354 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 MAST2Q6P0Q8 1798 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 TAF1LQ8IZX4 1826 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 CHD3Q12873 2000 aaKnown RBP-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 ERICH2A1L162 156 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 DPRXA6NFQ7 191 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 YKT6O15498 198 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 IGKV1-5P01602 117 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 OR4E1P0C645 316 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 CASP1P29466 404 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 PMS2P3Q13401 168 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 CLVS2Q5SYC1 327 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 C1orf195Q5TG92 126 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 PRR15Q8IV56 129 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 H1FXQ92522 213 aaKnown RBP-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 LYSMD1Q96S90 227 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 LINC00467Q9BRT7 94 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 WFDC10AQ9H1F0 79 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 TCEAL2Q9H3H9 227 aaPredicted RBP-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 FBXL12Q9NXK8 326 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 C3orf18Q9UK00 162 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 LSM5Q9Y4Y9 91 aaKnown RBP-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 HIVEP3Q5T1R4 2406 aa-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 NSD1Q96L73 2696 aaPredicted RBP-0.24□□□□□ -2.45
SNORD28B-201ENST00000390993 HEATR1Q9H583 2144 aaKnown RBP-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 KNTC1P50748 2209 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TRAV23DV6A0A075B6W5 121 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 A0A087X0T9 212 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 ZNF727A8MUV8 499 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 F5H768 121 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 JMJD7-PLA2G4BH0Y9G9 81 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 SMLR1H3BR10 107 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 J3QRK9 145 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TYMSP04818 313 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 COX7CP15954 63 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 RPL12P30050 165 aaKnown RBP-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 MAGEA2P43356 314 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 RHOBP62745 196 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TSNQ15631 228 aaKnown RBP-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 OGFRL1Q5TC84 451 aaPredicted RBP-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 C4orf22Q6V702 233 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 Q6ZQY7 126 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 FUNDC1Q8IVP5 155 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 C20orf196Q8IYI0 205 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 PIGXQ8TBF5 258 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 C19orf60Q96EN9 201 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 HIST1H2BLQ99880 126 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 DRC3Q9H069 523 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 BCL2L10Q9HD36 194 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TREM1Q9NP99 234 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 FGFR1OP2Q9NVK5 253 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 UTP11Q9Y3A2 253 aaKnown RBP-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TMEM56-RWDD3S4R434 201 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 U3KQA8 63 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 ABCC11Q96J66 1382 aa-0.25□□□□□ -2.45
SNORD28B-201ENST00000390993 TRAV10A0A0B4J240 114 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 ODAMA1E959 279 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 TRPC5OSA6NMA1 111 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 PSMD12O00232 456 aaPredicted RBP-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 CRYZL1O95825 349 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 HLA-DRB1P01911 266 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 CDC42P60953 191 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 PSME3P61289 254 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 NAA20P61599 178 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 MED21Q13503 144 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 HIST2H3PS2Q5TEC6 136 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 AADACL4Q5VUY2 407 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 SPOPLQ6IQ16 392 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 LRRN1Q6UXK5 716 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 LYG2Q86SG7 212 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 Q86TA4 180 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 KRT222Q8N1A0 295 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 OR52L1Q8NGH7 329 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 OR5D14Q8NGL3 314 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 FAM213BQ8TBF2 198 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 DNAJB3Q8WWF6 145 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 OR52E6Q96RD3 313 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 NIPSNAP1Q9BPW8 284 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 C7orf50Q9BRJ6 194 aaKnown RBP-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 UPF3BQ9BZI7 483 aaKnown RBP-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 CCDC90BQ9GZT6 254 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 BOKQ9UMX3 212 aaPredicted RBP-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 CYSLTR1Q9Y271 337 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 LY96Q9Y6Y9 160 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 ASXL3Q9C0F0 2248 aa-0.26□□□□□ -2.45
SNORD28B-201ENST00000390993 UBR5O95071 2799 aaPredicted RBP-0.27□□□□□ -2.45
SNORD28B-201ENST00000390993 UNC13CQ8NB66 2214 aa-0.27□□□□□ -2.45
SNORD28B-201ENST00000390993 EXOC1LA0A1B0GW35 172 aa-0.27□□□□□ -2.45
SNORD28B-201ENST00000390993 C10orf142B7Z368 130 aa-0.27□□□□□ -2.45
SNORD28B-201ENST00000390993 GOLGA8KD6RF30 607 aa-0.27□□□□□ -2.45
SNORD28B-201ENST00000390993 PIRO00625 290 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms