RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 NAT8BQ9UHF3 227 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 DOPEY1Q5JWR5 2465 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 TMEM178BH3BS89 294 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 THBDP07204 575 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 MGST1P10620 155 aaKnown RBP11.17□□□□□ -0.62
NEK4-202ENST00000383721 BSPH1Q075Z2 132 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
NEK4-202ENST00000383721 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 PATE2Q6UY27 113 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 H1FXQ92522 213 aaKnown RBP11.17□□□□□ -0.62
NEK4-202ENST00000383721 SAP30LQ9HAJ7 183 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 GNB4Q9HAV0 340 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
NEK4-202ENST00000383721 SPTAN1Q13813 2472 aaKnown RBP11.16□□□□□ -0.62
NEK4-202ENST00000383721 IGKV1D-37A0A075B6S9 117 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 A0A1W2PN81 502 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 IGLV2-23P01705 113 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 PYYP10082 97 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 CDKN1AP38936 164 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 CCL17Q92583 94 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 NPIPB3Q92617 1050 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 ST6GALNAC6Q969X2 333 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 RNF2Q99496 336 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 SNHG12Q9BXW3 62 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 ZNF430Q9H8G1 570 aaPredicted RBP11.16□□□□□ -0.62
NEK4-202ENST00000383721 MRPL36Q9P0J6 103 aaKnown RBP11.16□□□□□ -0.62
NEK4-202ENST00000383721 SMIM27A0A1W2PRY6 76 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 TNFRSF13BO14836 293 aaPredicted RBP11.16□□□□□ -0.62
NEK4-202ENST00000383721 KIAA1644Q3SXP7 199 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 WDR73Q6P4I2 378 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 TGIF2LXQ8IUE1 241 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 OR4A5Q8NH83 315 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
NEK4-202ENST00000383721 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 CA1P00915 261 aaPredicted RBP11.15□□□□□ -0.62
NEK4-202ENST00000383721 MT-ND6P03923 174 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 TEX43Q6ZNM6 134 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 ZNF596Q8TC21 504 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
NEK4-202ENST00000383721 FSTL3O95633 263 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 MRPL54Q6P161 138 aaKnown RBP11.15□□□□□ -0.63
NEK4-202ENST00000383721 LINC00311Q8N616 119 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 FAM168AQ92567 244 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 RITA1Q96K30 269 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 SAMD10Q9BYL1 202 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 SERTAD4Q9NUC0 356 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 CTSZQ9UBR2 303 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 RNF114Q9Y508 228 aa11.15□□□□□ -0.63
NEK4-202ENST00000383721 TCRBV4S1A1TA0A5B7 111 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 NDUFB3O43676 98 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
NEK4-202ENST00000383721 C10orf113Q5VZT2 155 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 PAXXQ9BUH6 204 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 WASHC3Q9Y3C0 194 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 AMMECR1Q9Y4X0 333 aaPredicted RBP11.14□□□□□ -0.63
NEK4-202ENST00000383721 LOXP28300 417 aaPredicted RBP11.14□□□□□ -0.63
NEK4-202ENST00000383721 COMPP49747 757 aaPredicted RBP11.14□□□□□ -0.63
NEK4-202ENST00000383721 MRGPRG-AS1Q2M3A8 158 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 C8orf31Q8N9H6 132 aa11.14□□□□□ -0.63
NEK4-202ENST00000383721 A0A1W2PPI3 338 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 J3QKU1 62 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 BMPR1BO00238 502 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 SLC25A17O43808 307 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 AMY1AP04745 511 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 REG1AP05451 166 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 GPX1P07203 203 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 DLX6P56179 175 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 NUTF2P61970 127 aaKnown RBP11.13□□□□□ -0.63
NEK4-202ENST00000383721 COX19Q49B96 90 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 LRRC10Q5BKY1 277 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 THAP8Q8NA92 274 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 FBXL7Q9UJT9 491 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 BRS3P32247 399 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEK4-202ENST00000383721 RUSC1-AS1Q66K80 236 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 VN1R17PQ8TDU5 208 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 FXYD5Q96DB9 178 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 RCHY1Q96PM5 261 aa11.13□□□□□ -0.63
NEK4-202ENST00000383721 SSBP3Q9BWW4 388 aaPredicted RBP11.13□□□□□ -0.63
NEK4-202ENST00000383721 FASNP49327 2511 aaKnown RBP11.12□□□□□ -0.63
NEK4-202ENST00000383721 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
NEK4-202ENST00000383721 ZNF137PP52743 207 aa11.12□□□□□ -0.63
NEK4-202ENST00000383721 OR10J3Q5JRS4 329 aa11.12□□□□□ -0.63
NEK4-202ENST00000383721 C20orf144Q9BQM9 153 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms