RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 IZUMO4Q1ZYL8 232 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 TRIQKQ629K1 86 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 OR13C8Q8NGS7 320 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 OR4X1Q8NH49 305 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 ZNF414Q96IQ9 312 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 METTL26Q96S19 204 aa9.58□□□□□ -0.88
RPAIN-202ENST00000381208 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.58□□□□□ -0.88
RPAIN-202ENST00000381208 PLECQ15149 4684 aaKnown RBP9.58□□□□□ -0.88
RPAIN-202ENST00000381208 IGHV3-49A0A0A0MS15 119 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 CLN5O75503 358 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 CDS2O95674 445 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 RNASE2P10153 161 aaKnown RBP9.57□□□□□ -0.88
RPAIN-202ENST00000381208 NPPCP23582 126 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 OPRK1P41145 380 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 HTR2BP41595 481 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 EIF2B2P49770 351 aaKnown RBP9.57□□□□□ -0.88
RPAIN-202ENST00000381208 ASAH1Q13510 395 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 AARDQ4LEZ3 155 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 SPINK9Q5DT21 86 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 NOXA1Q86UR1 476 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 APRG1Q8IVJ8 170 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 MFFQ9GZY8 342 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM222Q9H0R3 208 aa9.57□□□□□ -0.88
RPAIN-202ENST00000381208 IGKV3-7A0A075B6H7 116 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 TEX13DA0A0J9YY54 714 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 CTDSPLO15194 276 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 INPP1P49441 399 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 RPL11P62913 178 aaKnown RBP9.56□□□□□ -0.88
RPAIN-202ENST00000381208 BSXQ3C1V8 233 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 SP6Q3SY56 376 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM41BQ5BJD5 291 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 MZT2BQ6NZ67 158 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 GBGT1Q8N5D6 347 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 MARCH1Q8TCQ1 289 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 SMIM4Q8WVI0 70 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 ST8SIA2Q92186 375 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 RBPMSQ93062 196 aaKnown RBP9.56□□□□□ -0.88
RPAIN-202ENST00000381208 GRAMD2BQ96HH9 432 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 SCGB3A2Q96PL1 93 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 PRRT1Q99946 306 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 RARRES2Q99969 163 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 MS4A6AQ9H2W1 248 aa9.56□□□□□ -0.88
RPAIN-202ENST00000381208 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 PIGBOS1A0A0B4J2F0 54 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 OR5AC1P0C628 307 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 AKAIN1P0CW23 69 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 SLC25A4P12235 298 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 BAK1Q16611 211 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 ETFRF1Q6IPR1 90 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 OR4D10Q8NGI6 311 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 RNASEH2CQ8TDP1 164 aaKnown RBP9.55□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM230Q96A57 120 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
RPAIN-202ENST00000381208 NAA60Q9H7X0 242 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 KCNIP3Q9Y2W7 256 aa9.55□□□□□ -0.88
RPAIN-202ENST00000381208 LY6G6CO95867 125 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 HNRNPCP07910 306 aaKnown RBP eCLIP9.54□□□□□ -0.88
RPAIN-202ENST00000381208 CRYBB3P26998 211 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM187Q14656 261 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 STHQ8IWL8 128 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 OR1S2Q8NGQ3 325 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 GLYATL2Q8WU03 294 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 IL22RA2Q969J5 263 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 FNDC4Q9H6D8 234 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-202ENST00000381208 HEYLQ9NQ87 328 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-202ENST00000381208 TBC1D24Q9ULP9 559 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 BIRC6Q9NR09 4857 aa9.54□□□□□ -0.88
RPAIN-202ENST00000381208 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 A0A1B0GU03 582 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 HELTA6NFD8 242 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-202ENST00000381208 AP2S1P53680 142 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-202ENST00000381208 DEFB131AP59861 70 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 C2orf83Q53S99 150 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 OR11H2Q8NH07 326 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 Q8WTZ3 238 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-202ENST00000381208 RTBDNQ9BSG5 229 aaPredicted RBP9.53□□□□□ -0.88
RPAIN-202ENST00000381208 RABAC1Q9UI14 185 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 SCP2D1Q9UJQ7 156 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 GPR132Q9UNW8 380 aa9.53□□□□□ -0.88
RPAIN-202ENST00000381208 CRYM-AS1A6NIL9 109 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 GSTZ1O43708 216 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 IGKV1-17P01599 117 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 APOHP02749 345 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 IFNA4P05014 189 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 SPP1P10451 314 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 P2RY1P47900 373 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 ATP5IP56385 69 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 TCTAP57738 103 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 EWSR1Q01844 656 aaKnown RBP eCLIP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 TMEM268Q5VZI3 342 aa9.52□□□□□ -0.88
RPAIN-202ENST00000381208 MORN3Q6PF18 240 aaPredicted RBP9.52□□□□□ -0.88
RPAIN-202ENST00000381208 Q6ZRM9 215 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms