RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 SLC25A48Q6ZT89 311 aaKnown RBP13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 NIT1Q86X76 327 aa13.15□□□□□ -0.3
NKX3-1-201ENST00000380871 SMIM27A0A1W2PRY6 76 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 ITGB1BP1O14713 200 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 DLEU1O43261 78 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 APELAP0DMC3 54 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 CD69Q07108 199 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 GDF5OSQ5U4N7 250 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 HARBI1Q96MB7 349 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 MRPL36Q9P0J6 103 aaKnown RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF257Q9Y2Q1 563 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 PPIAL4EA0A075B759 164 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 hADV38S2A0JD32 116 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 PPIAL4DF5H284 164 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 C3orf79P0CE67 100 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 PPIAL4FP0DN26 164 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 GRNP28799 593 aaKnown RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 RUSC1-AS1Q66K80 236 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 ADTRPQ96IZ2 230 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 RPUSD1Q9UJJ7 312 aaKnown RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF324O75467 553 aaPredicted RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 GPR6P46095 362 aaPredicted RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 GNG5P63218 68 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 WDR73Q6P4I2 378 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 SSBP4Q9BWG4 385 aaPredicted RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 FNDC4Q9H6D8 234 aaPredicted RBP13.14□□□□□ -0.31
NKX3-1-201ENST00000380871 PSMB11A5LHX3 300 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 USF1P22415 310 aaPredicted RBP13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 CTRLP40313 264 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 TAS2R45P59539 299 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 ENSAO43768 121 aaKnown RBP13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 APCSP02743 223 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 MT-ND6P03923 174 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 REG1AP05451 166 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 GATA4P43694 442 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 RNF2Q99496 336 aa13.13□□□□□ -0.31
NKX3-1-201ENST00000380871 A0A1W2PN81 502 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 FNDC10F2Z333 226 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 M0QZK8 103 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 CORTO00230 105 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 FCN3O75636 299 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 ARL2-SNX15V9GYD0 113 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 OR10X1Q8NGY0 326 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 GOLT1BQ9Y3E0 138 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 AMMECR1Q9Y4X0 333 aaPredicted RBP13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 WT1-ASQ06250 92 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 TMEM200BQ69YZ2 307 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 C19orf35Q6ZS72 473 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 NPIPB3Q92617 1050 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
NKX3-1-201ENST00000380871 E7EQL1 145 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 LY6HO94772 140 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 MFAP2P55001 183 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF841Q6ZN19 808 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 C18orf32Q8TCD1 76 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 RAXQ9Y2V3 346 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 CGB1A6NKQ9 187 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 NDUFB3O43676 98 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 CD24P25063 80 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 OR4B1Q8NGF8 309 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 DNAJC4Q9NNZ3 241 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
NKX3-1-201ENST00000380871 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 RPL8P62917 257 aaKnown RBP13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 OR5B3Q8NH48 314 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 RNASE6Q93091 150 aaKnown RBP13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF714Q96N38 554 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 TPSG1Q9NRR2 321 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 BET1LQ9NYM9 111 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 RPH3ALQ9UNE2 315 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 COX7A2P2O60397 106 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 HYPMO75409 117 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 CAMPP49913 170 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 VSTM5A8MXK1 200 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 VWC2LB2RUY7 222 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 H0YJW9 148 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 H3BTX0 84 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 TNXAQ16473 311 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF329Q86UD4 541 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 NUP35Q8NFH5 326 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
NKX3-1-201ENST00000380871 LRBAP50851 2863 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 Q6ZVH6 145 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 STPG4Q8N801 248 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 NUP37Q8NFH4 326 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 NUDT10Q8NFP7 164 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 NUDT11Q96G61 164 aa13.09□□□□□ -0.31
NKX3-1-201ENST00000380871 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms