RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 NOXA1Q86UR1 476 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 UXS1Q8NBZ7 420 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 OR52B4Q8NGK2 314 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 TMEM190Q8WZ59 177 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 FNDC4Q9H6D8 234 aaPredicted RBP6.99□□□□□ -1.29
HMGN1-202ENST00000380747 NUDT15Q9NV35 164 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 MRPL36Q9P0J6 103 aaKnown RBP6.99□□□□□ -1.29
HMGN1-202ENST00000380747 TBC1D24Q9ULP9 559 aa6.99□□□□□ -1.29
HMGN1-202ENST00000380747 PAIP2BQ9ULR5 123 aaKnown RBP6.99□□□□□ -1.29
HMGN1-202ENST00000380747 TENM2Q9NT68 2774 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MED6O75586 246 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 TMEM50AO95807 157 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 ELLP55199 621 aaPredicted RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 CD69Q07108 199 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 GUCA2BQ16661 112 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 DEFB114Q30KQ6 69 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 BTNL8Q6UX41 500 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 OR2K2Q8NGT1 345 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 ENKURQ8TC29 256 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 RNASEH2CQ8TDP1 164 aaKnown RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MITD1Q8WV92 249 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 TMEM170AQ8WVE7 144 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MARC2Q969Z3 335 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 SEC22CQ9BRL7 303 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MAGT1Q9H0U3 335 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 TECRQ9NZ01 308 aaKnown RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 LSM4Q9Y4Z0 139 aaKnown RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 U3KQ87 197 aa6.98□□□□□ -1.29
HMGN1-202ENST00000380747 HUWE1Q7Z6Z7 4374 aaKnown RBP6.98□□□□□ -1.29
HMGN1-202ENST00000380747 MPTX1A8MV57 137 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 FAM90A26D6RGX4 464 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 WRBO00258 174 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 CLN5O75503 358 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 SCGB2A1O75556 95 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 IFNA4P05014 189 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 RND2P52198 227 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 IFITM3Q01628 133 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 ETFRF1Q6IPR1 90 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 GTSCR1Q86UQ5 136 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 OR4X1Q8NH49 305 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 ZNF431Q8TF32 576 aaPredicted RBP6.97□□□□□ -1.29
HMGN1-202ENST00000380747 ACY3Q96HD9 319 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 DAZ1Q9NQZ3 744 aaKnown RBP6.97□□□□□ -1.29
HMGN1-202ENST00000380747 MLXQ9UH92 298 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 SMAD5-AS1Q9Y6J3 95 aa6.97□□□□□ -1.29
HMGN1-202ENST00000380747 IGHV3-49A0A0A0MS15 119 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 ZNF785A8K8V0 405 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 C3orf84H3BNL1 204 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 K7EMT4 169 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 CCSO14618 274 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 SYNGR2O43760 224 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 SCAF4O95104 1147 aaKnown RBP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 SCGB1D2O95969 90 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 NHLRC4P0CG21 123 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 SLC25A4P12235 298 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 RAB11AP62491 216 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 IAH1Q2TAA2 248 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 TIGITQ495A1 244 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 PRSS54Q6PEW0 395 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 ZNF600Q6ZNG1 722 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 RBPMS2Q6ZRY4 209 aaKnown RBP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 SLC16A13Q7RTY0 426 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 TMEM61Q8N0U2 210 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 NPIPB3Q92617 1050 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 ZNF414Q96IQ9 312 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 OR10C1Q96KK4 312 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 CIB3Q96Q77 187 aaPredicted RBP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 GINS3Q9BRX5 216 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 GSKIPQ9P0R6 139 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 PUS1Q9Y606 427 aaKnown RBP eCLIP6.96□□□□□ -1.3
HMGN1-202ENST00000380747 STARD9Q9P2P6 4700 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 CSMD3Q7Z407 3707 aa6.96□□□□□ -1.3
HMGN1-202ENST00000380747 TRAV30A0A087WSZ9 112 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 IGHV7-4-1A0A0J9YVY3 117 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 C15orf62A8K5M9 175 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 FAM25EA8MYX2 175 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 H3BP45 60 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 C8orf88P0DMB2 117 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 NKX2-1P43699 371 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 ATP5IP56385 69 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 DEFA1P59665 94 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 DEFA3P59666 94 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 CD81P60033 236 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 POLR2GP62487 172 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 RPP30P78346 268 aaKnown RBP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 SPANXN5Q5MJ07 72 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 TOMM20LQ6UXN7 152 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 C12orf45Q8N5I9 185 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 ZBTB8BQ8NAP8 495 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-202ENST00000380747 TMEM116Q8NCL8 245 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 OR4D5Q8NGN0 318 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 OR1S2Q8NGQ3 325 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 SLC35E1Q96K37 410 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 ASCL2Q99929 193 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 SMPXQ9UHP9 88 aa6.95□□□□□ -1.3
HMGN1-202ENST00000380747 IGHV3OR16-13A0A075B7E8 117 aa6.94□□□□□ -1.3
HMGN1-202ENST00000380747 TRAV14DV4A0A0A6YYC5 116 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms