RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 LGALS4P56470 323 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 EBI3Q14213 229 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 DOPEY1Q5JWR5 2465 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 PATE2Q6UY27 113 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 OR5AU1Q8NGC0 362 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 SIRPDQ9H106 197 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 ZNF355PQ9NSJ1 428 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 BAHCC1Q9P281 2608 aa18.41■□□□□ 0.54
VPS16-201ENST00000380443 TRBV20OR9-2A0A075B6H5 130 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 IGHV2-70DA0A0C4DH43 119 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 HELTA6NFD8 242 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 C19orf84I3L1E1 186 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 FCN1O00602 326 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 HOXA5P20719 270 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 FAM3BP58499 235 aaPredicted RBP18.4■□□□□ 0.54
VPS16-201ENST00000380443 UBE2L3P68036 154 aaKnown RBP18.4■□□□□ 0.54
VPS16-201ENST00000380443 KLRD1Q13241 179 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 PAXXQ9BUH6 204 aa18.4■□□□□ 0.54
VPS16-201ENST00000380443 FABP1P07148 127 aa18.39■□□□□ 0.54
VPS16-201ENST00000380443 HOXB4P17483 251 aaPredicted RBP18.39■□□□□ 0.54
VPS16-201ENST00000380443 ZFP36P26651 326 aaKnown RBP18.39■□□□□ 0.54
VPS16-201ENST00000380443 C5orf64Q2M2E5 130 aa18.39■□□□□ 0.54
VPS16-201ENST00000380443 LHFPL4Q7Z7J7 247 aa18.39■□□□□ 0.54
VPS16-201ENST00000380443 OCC1Q8TAD7 63 aa18.39■□□□□ 0.54
VPS16-201ENST00000380443 OR51M1Q9H341 326 aa18.39■□□□□ 0.54
VPS16-201ENST00000380443 HIST1H2BKO60814 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BJP06899 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BOP23527 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BBP33778 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BDP58876 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BCP62807 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST2H2BEQ16778 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.39■□□□□ 0.53
VPS16-201ENST00000380443 OR5T1Q8NG75 326 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 OR10G8Q8NGN5 311 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BHQ93079 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BNQ99877 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 HIST1H2BMQ99879 126 aa18.39■□□□□ 0.53
VPS16-201ENST00000380443 TRAV9-1A0A075B6T8 112 aa18.38■□□□□ 0.53
VPS16-201ENST00000380443 I3L2K1 104 aa18.38■□□□□ 0.53
VPS16-201ENST00000380443 NECAP1Q8NC96 275 aa18.38■□□□□ 0.53
VPS16-201ENST00000380443 TMEM190Q8WZ59 177 aa18.38■□□□□ 0.53
VPS16-201ENST00000380443 WNT10AQ9GZT5 417 aa18.38■□□□□ 0.53
VPS16-201ENST00000380443 NDUFS7O75251 213 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 HYPMO75409 117 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 FXYD3Q14802 87 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 TEX38Q6PEX7 206 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 LINC00305Q7Z4B0 112 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 ZNF98A6NK75 572 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 PHOX2AO14813 284 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 S100A9P06702 114 aaKnown RBP18.37■□□□□ 0.53
VPS16-201ENST00000380443 CRYBB3P26998 211 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 GNG4P50150 75 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 MEOX2P50222 304 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 UBE2E1P51965 193 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 TAS2R60P59551 318 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 SUMO1P63165 101 aaKnown RBP18.37■□□□□ 0.53
VPS16-201ENST00000380443 ZNF562Q6V9R5 426 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 Q8N6K4 173 aa18.37■□□□□ 0.53
VPS16-201ENST00000380443 GGTLC3B5MD39 225 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 IGHV3-48P01763 117 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 OR10J4P0C629 311 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 CDX1P47902 265 aaPredicted RBP18.36■□□□□ 0.53
VPS16-201ENST00000380443 PDLIM4P50479 330 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 LMO4P61968 165 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 HES1Q14469 280 aa18.36■□□□□ 0.53
VPS16-201ENST00000380443 POLR3KQ9Y2Y1 108 aaPredicted RBP18.36■□□□□ 0.53
VPS16-201ENST00000380443 TRAV5A0A0B4J249 113 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 A0A1W2PPQ1 181 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 TOX4O94842 621 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 SMIM6P0DI80 62 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 NDUFA6P56556 154 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 FRZBQ92765 325 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 ELOVL1Q9BW60 279 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 LPAR2Q9HBW0 351 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 DMRT1Q9Y5R6 373 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 DOPEY2Q9Y3R5 2298 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 TRGC1P0CF51 173 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 TIGITQ495A1 244 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 MORN5Q5VZ52 161 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 OR1B1Q8NGR6 318 aa18.35■□□□□ 0.53
VPS16-201ENST00000380443 NAV3Q8IVL0 2385 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 NPIPB5A8MRT5 1133 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 IGLC1P0CG04 106 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 FXYD5Q96DB9 178 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 C12orf57Q99622 126 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 C1RLQ9NZP8 487 aa18.34■□□□□ 0.53
VPS16-201ENST00000380443 APELAP0DMC3 54 aa18.33■□□□□ 0.53
VPS16-201ENST00000380443 ORM2P19652 201 aa18.33■□□□□ 0.53
VPS16-201ENST00000380443 IGFBPL1Q8WX77 278 aa18.33■□□□□ 0.53
VPS16-201ENST00000380443 USP9YO00507 2555 aaPredicted RBP18.33■□□□□ 0.52
VPS16-201ENST00000380443 PGPEP1LA6NFU8 196 aa18.33■□□□□ 0.52
VPS16-201ENST00000380443 CENPWQ5EE01 88 aa18.33■□□□□ 0.52
VPS16-201ENST00000380443 RASL11BQ9BPW5 248 aa18.33■□□□□ 0.52
VPS16-201ENST00000380443 BPESC1Q9GZL8 116 aa18.33■□□□□ 0.52
VPS16-201ENST00000380443 AURKAIP1Q9NWT8 199 aaPredicted RBP18.33■□□□□ 0.52
VPS16-201ENST00000380443 TRAV30A0A087WSZ9 112 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 PLXNB1O43157 2135 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 FAM106CPP0CH98 169 aa18.32■□□□□ 0.52
VPS16-201ENST00000380443 BRS3P32247 399 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms