RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 TMEM183BQ1AE95 376 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 ZGRF1Q86YA3 2104 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 TNFRSF14Q92956 283 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 TNFRSF19Q9NS68 423 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 ZNF586Q9NXT0 402 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 ZNF835Q9Y2P0 537 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 NBEAQ8NFP9 2946 aa14.62□□□□□ -0.07
TDP2-202ENST00000378198 IGLC7A0M8Q6 106 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 APCSP02743 223 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 REG1AP05451 166 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 SRIP30626 198 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 MYCNOSP40205 109 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 TBR1Q16650 682 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 DMRTC2Q8IXT2 367 aaPredicted RBP14.61□□□□□ -0.07
TDP2-202ENST00000378198 VN1R17PQ8TDU5 208 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 C22orf15Q8WYQ4 148 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 FAM168AQ92567 244 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 RITA1Q96K30 269 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 TRGV9Q99603 122 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 SHISA9B4DS77 424 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 RAB4AP20338 218 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 MRPL52Q86TS9 123 aaKnown RBP14.61□□□□□ -0.07
TDP2-202ENST00000378198 C11orf42Q8N5U0 333 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 NUDT10Q8NFP7 164 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 NUDT11Q96G61 164 aa14.61□□□□□ -0.07
TDP2-202ENST00000378198 A0A1W2PS18 150 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 C22orf46C9J442 243 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 E7EQL1 145 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 CA1P00915 261 aaPredicted RBP14.6□□□□□ -0.07
TDP2-202ENST00000378198 SMIM12Q96EX1 92 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 FAM103A1Q9BTL3 118 aaKnown RBP14.6□□□□□ -0.07
TDP2-202ENST00000378198 VAMP8Q9BV40 100 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 SSBP3Q9BWW4 388 aaPredicted RBP14.6□□□□□ -0.07
TDP2-202ENST00000378198 FBXL7Q9UJT9 491 aa14.6□□□□□ -0.07
TDP2-202ENST00000378198 TBL2Q9Y4P3 447 aaKnown RBP14.6□□□□□ -0.07
TDP2-202ENST00000378198 TRAV34A0A0B4J273 112 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 IGHV1-69-2A0A0G2JMI3 117 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
TDP2-202ENST00000378198 AMTP48728 403 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 COMPP49747 757 aaPredicted RBP14.59□□□□□ -0.07
TDP2-202ENST00000378198 UBE2G1P62253 170 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 Q8NA96 180 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 MIEN1Q9BRT3 115 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 NRN1Q9NPD7 142 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 EPDR1Q9UM22 224 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 ARFGEF3Q5TH69 2177 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 CORTO00230 105 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 HIST1H1EP10412 219 aaKnown RBP14.59□□□□□ -0.07
TDP2-202ENST00000378198 ORM2P19652 201 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 PRRX1P54821 245 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 PAX2Q02962 417 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 TNXAQ16473 311 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 TDRG1Q3Y452 100 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 ZNF705AQ6ZN79 300 aaPredicted RBP14.59□□□□□ -0.07
TDP2-202ENST00000378198 OR1B1Q8NGR6 318 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 RCHY1Q96PM5 261 aa14.59□□□□□ -0.07
TDP2-202ENST00000378198 IGHV3-72A0A0B4J1Y9 119 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 M0QZK8 103 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 MOSP00540 346 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 SLC25A5P05141 298 aaKnown RBP14.58□□□□□ -0.08
TDP2-202ENST00000378198 CRYGBP07316 175 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 HCP5Q6MZN7 132 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 TMEM116Q8NCL8 245 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 TMEM68Q96MH6 324 aa14.58□□□□□ -0.08
TDP2-202ENST00000378198 ZNF324O75467 553 aaPredicted RBP14.57□□□□□ -0.08
TDP2-202ENST00000378198 PLAUP00749 431 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 APOBEC3AP31941 199 aaPredicted RBP14.57□□□□□ -0.08
TDP2-202ENST00000378198 MFAP2P55001 183 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 KRTDAPP60985 99 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 TCF15Q12870 199 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 NUP35Q8NFH5 326 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 C7orf69Q9H7B7 122 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 MRPL27Q9P0M9 148 aaKnown RBP14.57□□□□□ -0.08
TDP2-202ENST00000378198 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
TDP2-202ENST00000378198 PGPA6NDG6 321 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 TCAPO15273 167 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 CASP6P55212 293 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 GNG5P63218 68 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 TSKUQ8WUA8 353 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 RALYQ9UKM9 306 aaKnown RBP14.57□□□□□ -0.08
TDP2-202ENST00000378198 PAM16Q9Y3D7 125 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 KLF12Q9Y4X4 402 aa14.57□□□□□ -0.08
TDP2-202ENST00000378198 IGHV2-26A0A0B4J1V2 119 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 DIRC3C9JPN6 131 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 HYPMO75409 117 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 NBEAP1P0C6P0 100 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 PLP1P60201 277 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 SLAQ13239 276 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 OR4B1Q8NGF8 309 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 BLNKQ8WV28 456 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 SIGLEC9Q9Y336 463 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 CNOT1A5YKK6 2376 aaKnown RBP14.56□□□□□ -0.08
TDP2-202ENST00000378198 B9A039 149 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 IGLV1-47P01700 117 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 PMCHP20382 165 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 RUSC1-AS1Q66K80 236 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 PRR27Q6MZM9 219 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 Q8N976 141 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 RNF114Q9Y508 228 aa14.56□□□□□ -0.08
TDP2-202ENST00000378198 INSIG2Q9Y5U4 225 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms