RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 SLC35E1Q96K37 410 aa12.29□□□□□ -0.44
MSH5-203ENST00000375750 SPTA1P02549 2419 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 C8orf88P0DMB2 117 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 GAGE1Q13065 139 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 MRPL36Q9P0J6 103 aaKnown RBP12.28□□□□□ -0.44
MSH5-203ENST00000375750 RPH3ALQ9UNE2 315 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 LHBP01229 141 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 HNRNPA3P51991 378 aaKnown RBP12.28□□□□□ -0.44
MSH5-203ENST00000375750 DIAPH2-AS1Q14236 149 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 Q56UQ5 140 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 ZNF841Q6ZN19 808 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 ZNF331Q9NQX6 463 aaPredicted RBP12.28□□□□□ -0.44
MSH5-203ENST00000375750 PRNDQ9UKY0 176 aa12.28□□□□□ -0.44
MSH5-203ENST00000375750 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 C16orf97H3BN30 126 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 H3BTX0 84 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 MT-ND6P03923 174 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 EBLN2Q6P2I7 272 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 ERASQ7Z444 233 aa12.27□□□□□ -0.44
MSH5-203ENST00000375750 ZCCHC24Q8N2G6 241 aaKnown RBP12.27□□□□□ -0.44
MSH5-203ENST00000375750 ATRXP46100 2492 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 REG1AP05451 166 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 UNQ5815/PRO19632Q6UWF5 114 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 NUP35Q8NFH5 326 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 NUDT10Q8NFP7 164 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 NUDT11Q96G61 164 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 CLEC5AQ9NY25 188 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 LAMTOR2Q9Y2Q5 125 aa12.27□□□□□ -0.45
MSH5-203ENST00000375750 HLA-DQA1P01909 254 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 CD40P25942 277 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 GLRXP35754 106 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 RNASEKQ6P5S7 137 aaKnown RBP12.26□□□□□ -0.45
MSH5-203ENST00000375750 C19orf35Q6ZS72 473 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 WFDC8Q8IUA0 241 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 CORO2AQ92828 525 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 BORCS7Q96B45 105 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 GAFA1Q96PS6 74 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 MRPL20Q9BYC9 149 aaKnown RBP12.26□□□□□ -0.45
MSH5-203ENST00000375750 FNDC4Q9H6D8 234 aaPredicted RBP12.26□□□□□ -0.45
MSH5-203ENST00000375750 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 AMMECR1Q9Y4X0 333 aaPredicted RBP12.26□□□□□ -0.45
MSH5-203ENST00000375750 APELAP0DMC3 54 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 RBPJQ06330 500 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 CD69Q07108 199 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 DYSFO75923 2080 aa12.26□□□□□ -0.45
MSH5-203ENST00000375750 PSMB11A5LHX3 300 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 KLF3P57682 345 aaPredicted RBP12.25□□□□□ -0.45
MSH5-203ENST00000375750 TAS2R45P59539 299 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 BLNKQ8WV28 456 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 NPIPB3Q92617 1050 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 JKAMPQ9P055 326 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 PKDREJQ9NTG1 2253 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 CCL3L1P16619 93 aa12.25□□□□□ -0.45
MSH5-203ENST00000375750 IGHV3-21A0A0B4J1V1 117 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 SFTPCP11686 197 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 C3orf36Q3SXR2 165 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 C2orf83Q53S99 150 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 TCF24Q7RTU0 167 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 MRPL52Q86TS9 123 aaKnown RBP12.24□□□□□ -0.45
MSH5-203ENST00000375750 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 M0R2Z0 102 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 THBDP07204 575 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
MSH5-203ENST00000375750 HARBI1Q96MB7 349 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 CCL25O15444 150 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 HSBP1O75506 76 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 LINC00614P0C842 121 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 CFHR2P36980 270 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 FOXA3P55318 350 aaPredicted RBP12.24□□□□□ -0.45
MSH5-203ENST00000375750 MZT1Q08AG7 82 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 STUMQ69YW2 141 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 LINC00322Q6ZN03 302 aaPredicted RBP12.24□□□□□ -0.45
MSH5-203ENST00000375750 LINC00173Q6ZV60 143 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 PAXXQ9BUH6 204 aa12.24□□□□□ -0.45
MSH5-203ENST00000375750 MCRIP2Q9BUT9 160 aaKnown RBP12.24□□□□□ -0.45
MSH5-203ENST00000375750 PIEZO1Q92508 2521 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 COX7A2P2O60397 106 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 TSPOP30536 169 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 WT1-ASQ06250 92 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 KLRB1Q12918 225 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 POU2AF1Q16633 256 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 RTL8BQ17RB0 113 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 MBD6Q96DN6 1003 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 TNFRSF19Q9NS68 423 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 CGB1A6NKQ9 187 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 MOSP00540 346 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 TNFAIP6P98066 277 aaPredicted RBP12.23□□□□□ -0.45
MSH5-203ENST00000375750 PRB3Q04118 309 aaPredicted RBP12.23□□□□□ -0.45
MSH5-203ENST00000375750 SLC25A48Q6ZT89 311 aaKnown RBP12.23□□□□□ -0.45
MSH5-203ENST00000375750 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
MSH5-203ENST00000375750 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 URB1-AS1Q96HZ7 61 aa12.23□□□□□ -0.45
MSH5-203ENST00000375750 RNF7Q9UBF6 113 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms