RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 CSPG4Q6UVK1 2322 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 SRRM5B3KS81 715 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 K7EM74 188 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CHEK1O14757 476 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CYC1P08574 325 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CT45A6P0DMU7 189 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CT45A5P0DMU8 189 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CT45A7P0DMV0 189 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 CA7P43166 264 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 PAFAH1B2P68402 229 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 C17orf58Q2M2W7 97 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 TMEM177Q53S58 311 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 EXOC3-AS1Q8N2X6 119 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 KCNS1Q96KK3 526 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
MCF2L-202ENST00000375597 SLC25A10Q9UBX3 287 aaPredicted RBP9.6□□□□□ -0.87
MCF2L-202ENST00000375597 MRPS18CQ9Y3D5 142 aaKnown RBP9.6□□□□□ -0.87
MCF2L-202ENST00000375597 KBTBD11-OT1A0A1B0GTJ5 212 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 MPDU1O75352 247 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 PDLIM4P50479 330 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 KLF17Q5JT82 389 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-202ENST00000375597 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 NEUROG1Q92886 237 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 DYNLRB1Q9NP97 96 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 IGHV3OR16-13A0A075B7E8 117 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 IGHV3-74A0A0B4J1X5 117 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-202ENST00000375597 NUDT10Q8NFP7 164 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 OR4C5Q8NGB2 326 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 OR1L4Q8NGR5 311 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 ZNF596Q8TC21 504 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 NUDT11Q96G61 164 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 AMY1AP04745 511 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 IGFL4Q6B9Z1 124 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 LYPD2Q6UXB3 125 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 CENPVQ7Z7K6 275 aaPredicted RBP9.59□□□□□ -0.87
MCF2L-202ENST00000375597 PDPNQ86YL7 162 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 NUP35Q8NFH5 326 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 FAM222BQ8WU58 562 aa9.59□□□□□ -0.87
MCF2L-202ENST00000375597 CNIH1O95406 144 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 IGKV3-15P01624 115 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 AREGP15514 252 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 ZNF474Q6S9Z5 364 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-202ENST00000375597 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 FNDC4Q9H6D8 234 aaPredicted RBP9.58□□□□□ -0.88
MCF2L-202ENST00000375597 HES1Q14469 280 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 GOLT1AQ6ZVE7 132 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 OR8A1Q8NGG7 326 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 SLC25A33Q9BSK2 321 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 ASCL3Q9NQ33 180 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 PTPRQQ9UMZ3 2332 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 SORL1Q92673 2214 aa9.58□□□□□ -0.88
MCF2L-202ENST00000375597 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-202ENST00000375597 C1orf174Q8IYL3 243 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 OR8B3Q8NGG8 313 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 CELSR1Q9NYQ6 3014 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 YPEL1O60688 119 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 COL8A1P27658 744 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 GDF5OSQ5U4N7 250 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 YPEL2Q96QA6 119 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 PRNDQ9UKY0 176 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 TRAV17A0A0B4J275 112 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 NUDT3O95989 172 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 SP9P0CG40 484 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 CX3CL1P78423 397 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 EIF4EBP1Q13541 118 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-202ENST00000375597 OR4B1Q8NGF8 309 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 C18orf32Q8TCD1 76 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 ZNF430Q9H8G1 570 aaPredicted RBP9.57□□□□□ -0.88
MCF2L-202ENST00000375597 TNFRSF19Q9NS68 423 aa9.57□□□□□ -0.88
MCF2L-202ENST00000375597 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
MCF2L-202ENST00000375597 PRR33A8MZF0 331 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 PEX7O00628 323 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 KLK10O43240 276 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 IGHV1-46P01743 117 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 TNFSF4P23510 183 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
MCF2L-202ENST00000375597 WT1-ASQ06250 92 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 EBLN2Q6P2I7 272 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 RAB37Q96AX2 223 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 HILPDAQ9Y5L2 63 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 UPK2O00526 184 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 P01737 135 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 SPACA3Q8IXA5 215 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
MCF2L-202ENST00000375597 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
MCF2L-202ENST00000375597 A0A087X0K7 114 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 J3KRW8 73 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 CD99P14209 185 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 IGLL1P15814 213 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 HTR1DP28221 377 aa9.56□□□□□ -0.88
MCF2L-202ENST00000375597 C2CD3Q4AC94 2353 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms