RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 IGKV1-5P01602 117 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 FGF2P09038 288 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 KIR2DS2P43631 304 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 LPAR6P43657 344 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 MFAP2P55001 183 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 POLR2GP62487 172 aaKnown RBP eCLIP8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 CD300EQ496F6 205 aaPredicted RBP8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 TOR2AQ5JU69 321 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 CLEC19AQ6UXS0 136 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 Q6ZRM9 215 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 ZNF414Q96IQ9 312 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 WFDC10AQ9H1F0 79 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 FAM212BQ9NTI7 297 aaPredicted RBP8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 PLA2G2EQ9NZK7 142 aa8.29□□□□□ -1.08
EXOSC1-202ENST00000370885 TEX50A0A1B0GTY4 177 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 FAM24AA6NFZ4 105 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 TMEM50AO95807 157 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 CD7P09564 240 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 FOLR2P14207 255 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 NQO2P16083 231 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 PVALBP20472 110 aaPredicted RBP8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 PAX9P55771 341 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 WT1-ASQ06250 92 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 DEFB114Q30KQ6 69 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 EIF5AL1Q6IS14 154 aaKnown RBP8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 UNQ9165/PRO28630Q6UXU0 137 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 LINC00322Q6ZN03 302 aaPredicted RBP8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 OR2C3Q8N628 320 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 TMEM252Q8N6L7 170 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 UBAC2Q8NBM4 344 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 OR4A5Q8NH83 315 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 RNF141Q8WVD5 230 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 GAR1Q9NY12 217 aaKnown RBP8.28□□□□□ -1.08
EXOSC1-202ENST00000370885 IGSF23A1L1A6 192 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 TMEM213A2RRL7 107 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 GGCTO75223 188 aaKnown RBP8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 P0C879 139 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 G6PCP35575 357 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 ARL3P36405 182 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 EWSR1Q01844 656 aaKnown RBP eCLIP8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 NHLH2Q02577 135 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 CATR1Q13166 79 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 HAGHQ16775 308 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 GPHB5Q86YW7 130 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 MARC2Q969Z3 335 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 SAT2Q96F10 170 aaPredicted RBP8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 GINS3Q9BRX5 216 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 SLC25A31Q9H0C2 315 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 MAGT1Q9H0U3 335 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 LYRM2Q9NU23 88 aaPredicted RBP8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 MLXQ9UH92 298 aa8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 EPPK1P58107 5090 aaKnown RBP8.27□□□□□ -1.09
EXOSC1-202ENST00000370885 BORCS7-ASMTA0A0B4J1R7 106 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 IGHV3-35A0A0C4DH35 117 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 RBMY1BA6NDE4 496 aaKnown RBP8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 RBMY1EA6NEQ0 496 aaKnown RBP8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 MARCH11A6NNE9 402 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 F8W735 103 aaPredicted RBP8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 LGALS9O00182 355 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 KRASP01116 189 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 CLEC3BP05452 202 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 RBMY1DP0C7P1 496 aaKnown RBP8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 SULT1A2P50226 295 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 VAMP2P63027 116 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 TM4SF20Q53R12 229 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 CASC10Q5T4H9 136 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 LCN12Q6JVE5 192 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 OR1S2Q8NGQ3 325 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 ZNF502Q8TBZ5 544 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 RAB40CQ96S21 281 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 PLEKHA3Q9HB20 300 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 RETNQ9HD89 108 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 NDUFA4L2Q9NRX3 87 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 PEMTQ9UBM1 199 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 CACNG5Q9UF02 275 aa8.26□□□□□ -1.09
EXOSC1-202ENST00000370885 IGHV3-21A0A0B4J1V1 117 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 RAB19A4D1S5 217 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 KRBOX1C9JBD0 128 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 TEX46H3BTG2 121 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 SSSCA1O60232 199 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 ATG12O94817 140 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 SEC11BP0C7V7 166 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 OR13C7P0DN81 318 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 CBLN1P23435 193 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 DEFB125Q8N687 156 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 MUC7Q8TAX7 377 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 CD300LFQ8TDQ1 290 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 EEF1AKMT3Q96AZ1 226 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 QTRT1Q9BXR0 403 aaKnown RBP8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 COMMD5Q9GZQ3 224 aa8.25□□□□□ -1.09
EXOSC1-202ENST00000370885 A8MWP6 167 aa8.24□□□□□ -1.09
EXOSC1-202ENST00000370885 FAM90A26D6RGX4 464 aa8.24□□□□□ -1.09
EXOSC1-202ENST00000370885 C3orf84H3BNL1 204 aa8.24□□□□□ -1.09
EXOSC1-202ENST00000370885 SPP1P10451 314 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms