RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 C2orf83Q53S99 150 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
VMA21-202ENST00000370361 STHQ8IWL8 128 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 TMEM230Q96A57 120 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 KCNIP3Q9Y2W7 256 aa11.86□□□□□ -0.51
VMA21-202ENST00000370361 IGHV3OR16-13A0A075B7E8 117 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 IGHV3-74A0A0B4J1X5 117 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 A0A1B0GU03 582 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 HELTA6NFD8 242 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 LY6G6CO95867 125 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 CA1P00915 261 aaPredicted RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 SPP1P10451 314 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 YPEL3P61236 119 aaPredicted RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 SPANXN2Q5MJ10 180 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 Q6ZRM9 215 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 TOMM5Q8N4H5 51 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 OR11H2Q8NH07 326 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 PHLDA1Q8WV24 401 aaPredicted RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 DEDD2Q8WXF8 326 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 SRRQ9GZT4 340 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 FNDC4Q9H6D8 234 aaPredicted RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 HEYLQ9NQ87 328 aaPredicted RBP11.85□□□□□ -0.51
VMA21-202ENST00000370361 NDUFA13Q9P0J0 144 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 TMEM56-RWDD3S4R434 201 aa11.85□□□□□ -0.51
VMA21-202ENST00000370361 IGKV1-17P01599 117 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 IFNA4P05014 189 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 P2RY1P47900 373 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 ATP5IP56385 69 aaPredicted RBP11.84□□□□□ -0.51
VMA21-202ENST00000370361 DEFB131AP59861 70 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 EWSR1Q01844 656 aaKnown RBP eCLIP11.84□□□□□ -0.51
VMA21-202ENST00000370361 SLC24A4Q8NFF2 622 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 Q8WTZ3 238 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 SEPSECSQ9HD40 501 aaKnown RBP11.84□□□□□ -0.51
VMA21-202ENST00000370361 CACNG5Q9UF02 275 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
VMA21-202ENST00000370361 K7EQG2 157 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 APOHP02749 345 aaPredicted RBP11.83□□□□□ -0.52
VMA21-202ENST00000370361 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.52
VMA21-202ENST00000370361 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
VMA21-202ENST00000370361 SRPXP78539 464 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 C11orf45Q8TAV5 145 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 HRH4Q9H3N8 390 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 PFDN2Q9UHV9 154 aa11.83□□□□□ -0.52
VMA21-202ENST00000370361 CEBPZOSA8MTT3 80 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
VMA21-202ENST00000370361 IGLC1P0CG04 106 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 SULT1A3P0DMM9 295 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 SULT1A4P0DMN0 295 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 OR10J1P30954 320 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 RBMS2Q15434 407 aaKnown RBP11.82□□□□□ -0.52
VMA21-202ENST00000370361 ZNF124Q15973 351 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 LILRB2Q8N423 598 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 GPR146Q96CH1 333 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 U3KQ87 197 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 ALMS1Q8TCU4 4167 aa11.82□□□□□ -0.52
VMA21-202ENST00000370361 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 ANXA3P12429 323 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 AKR1C4P17516 323 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 NPY1RP25929 384 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 CCR6P51684 374 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 NMSQ5H8A3 153 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 PRSS54Q6PEW0 395 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
VMA21-202ENST00000370361 PRR13Q9NZ81 148 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 U3KQE9 123 aa11.81□□□□□ -0.52
VMA21-202ENST00000370361 A0A0B4J2A0 478 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 IGHV3-66A0A0C4DH42 116 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 MIFP14174 115 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 RND2P52198 227 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 SNRPD3P62318 126 aaKnown RBP11.8□□□□□ -0.52
VMA21-202ENST00000370361 BAK1Q16611 211 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 TIGITQ495A1 244 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 LEMD1Q68G75 181 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 CENPSQ8N2Z9 138 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 SDHCQ99643 169 aaPredicted RBP11.8□□□□□ -0.52
VMA21-202ENST00000370361 SLC25A21Q9BQT8 299 aaPredicted RBP11.8□□□□□ -0.52
VMA21-202ENST00000370361 MRPL36Q9P0J6 103 aaKnown RBP11.8□□□□□ -0.52
VMA21-202ENST00000370361 SHPKQ9UHJ6 478 aa11.8□□□□□ -0.52
VMA21-202ENST00000370361 TOMM40O96008 361 aa11.79□□□□□ -0.52
VMA21-202ENST00000370361 NUTF2P61970 127 aaKnown RBP11.79□□□□□ -0.52
VMA21-202ENST00000370361 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
VMA21-202ENST00000370361 C16orf54Q6UWD8 224 aa11.79□□□□□ -0.52
VMA21-202ENST00000370361 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
VMA21-202ENST00000370361 C1QTNF4Q9BXJ3 329 aa11.79□□□□□ -0.52
VMA21-202ENST00000370361 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 FABP1P07148 127 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 DHRS2Q13268 280 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 SMCO1Q147U7 214 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 MLANAQ16655 118 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 LYZL2Q7Z4W2 148 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 TMED4Q7Z7H5 227 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 LGI3Q8N145 548 aa11.78□□□□□ -0.52
VMA21-202ENST00000370361 FAM24BQ8N5W8 94 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms