RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 ZNF833PQ6ZTB9 187 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 C8orf31Q8N9H6 132 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 OR2D3Q8NGH3 330 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 C2orf88Q9BSF0 95 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 VSIRQ9H7M9 311 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 FBXL7Q9UJT9 491 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 MED12LQ86YW9 2145 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 APCSP02743 223 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 ID1P41134 155 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 ATP5G3P48201 142 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 NUTF2P61970 127 aaKnown RBP4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 POU2AF1Q16633 256 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 OR5AN1Q8NGI8 311 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 SLC25A33Q9BSK2 321 aa4.34□□□□□ -1.71
SMNDC1-202ENST00000369603 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 SMIM17P0DL12 118 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 NPPCP23582 126 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 LOXP28300 417 aaPredicted RBP4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 CDPF1Q6NVV7 123 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 OR10W1Q8NGF6 305 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM170AQ8WVE7 144 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 MGST2Q99735 147 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 C7orf69Q9H7B7 122 aa4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 TBL2Q9Y4P3 447 aaKnown RBP4.34□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A0G2JLM5 398 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SCO2A0A1W2PP80 73 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SHISA9B4DS77 424 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 PEX7O00628 323 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 OR2J3O76001 311 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 IGKV1-16P04430 117 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 LINC00205P59089 165 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 RPS20P60866 119 aaKnown RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM78Q5T7P6 136 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 VMO1Q7Z5L0 202 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF664Q8N3J9 261 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 OR4B1Q8NGF8 309 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SIGLEC9Q9Y336 463 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 ORM1P02763 201 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 CBLN1P23435 193 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 GATA2P23769 480 aaPredicted RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 FAM106AQ4KMX7 169 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SPATA45Q537H7 98 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SAPCD1Q5SSQ6 148 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 SPSB3Q6PJ21 355 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 PRSS3P2Q8NHM4 247 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 TRGV9Q99603 122 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 AGMATQ9BSE5 352 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 MRPL18Q9H0U6 180 aaKnown RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 DCAF16Q9NXF7 216 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 WNK2Q9Y3S1 2297 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 EML5Q05BV3 1969 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 NDUFS8O00217 210 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 GZMBP10144 247 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 VDAC2P45880 294 aaPredicted RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 HINT1P49773 126 aaPredicted RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 HOXA4Q00056 320 aaPredicted RBP4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 CRIP3Q6Q6R5 217 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 FMC1Q96HJ9 113 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 IL36BQ9NZH7 164 aa4.33□□□□□ -1.72
SMNDC1-202ENST00000369603 TMEM189A5PLL7 270 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C1QTNF9BB2RNN3 333 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 M0R2Z0 102 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 EREGO14944 169 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 AMY1AP04745 511 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C1QTNF9P0C862 333 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C5orf64Q2M2E5 130 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 GCSAMLQ5JQS6 135 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C10orf55Q5SWW7 151 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 UQCR10Q9UDW1 63 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 F11RQ9Y624 299 aaKnown RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 AKAP6Q13023 2319 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 A6NNC1 897 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 TRGV3P03979 118 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF134P52741 427 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 LY6EQ16553 131 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 GOLT1AQ6ZVE7 132 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 ZNF738Q8NE65 137 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C8orf46Q8TAG6 207 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 RNF125Q96EQ8 232 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 C16orf92Q96LL3 132 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 GPR82Q96P67 336 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 IMMP2LQ96T52 175 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 PRDM13Q9H4Q3 707 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 OTORQ9NRC9 128 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 PTPRQQ9UMZ3 2332 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 LOC102724200A0A096LPH7 203 aaPredicted RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 A8MWP6 167 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 KIAA1644Q3SXP7 199 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 DNLZQ5SXM8 178 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 DUX4L9Q6RFH8 374 aaPredicted RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 OR10J6PQ8NGY7 276 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 NDUFA4L2Q9NRX3 87 aa4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 YTHDF2Q9Y5A9 579 aaKnown RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 ANKHD1Q8IWZ3 2542 aaKnown RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.32□□□□□ -1.72
SMNDC1-202ENST00000369603 A0A1B0GWJ7 208 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms