RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 RPS10-NUDT3A0A1W2PQS6 291 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 GABARAPH6UMI1 98 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 OR5AC1P0C628 307 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 IGLC1P0CG04 106 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 YPEL3P61236 119 aaPredicted RBP11.61□□□□□ -0.55
CKS1B-202ENST00000368436 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
CKS1B-202ENST00000368436 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 C16orf54Q6UWD8 224 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 SELENOHQ8IZQ5 122 aaKnown RBP11.61□□□□□ -0.55
CKS1B-202ENST00000368436 CSNK1G2-AS1Q8NCQ2 148 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 OR1S2Q8NGQ3 325 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 MIXL1Q9H2W2 232 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 X6R8D5 127 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 HELTA6NFD8 242 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 IGLL5B9A064 214 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 SLC25A4P12235 298 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 DHODHQ02127 395 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 MEF2DQ14814 521 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 ACTL10Q5JWF8 245 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 RNASEH2CQ8TDP1 164 aaKnown RBP11.6□□□□□ -0.55
CKS1B-202ENST00000368436 Q8WTZ3 238 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 RBPMSQ93062 196 aaKnown RBP11.6□□□□□ -0.55
CKS1B-202ENST00000368436 GPR146Q96CH1 333 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 KRTAP17-1Q9BYP8 105 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 NAA60Q9H7X0 242 aa11.6□□□□□ -0.55
CKS1B-202ENST00000368436 HEYLQ9NQ87 328 aaPredicted RBP11.6□□□□□ -0.55
CKS1B-202ENST00000368436 C14orf166Q9Y224 244 aaKnown RBP11.6□□□□□ -0.55
CKS1B-202ENST00000368436 HNRNPCP07910 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CKS1B-202ENST00000368436 HLA-DMBP28068 263 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 EIF2B2P49770 351 aaKnown RBP11.59□□□□□ -0.55
CKS1B-202ENST00000368436 RND2P52198 227 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 AP2S1P53680 142 aaPredicted RBP11.59□□□□□ -0.55
CKS1B-202ENST00000368436 MRPS10P82664 201 aaKnown RBP11.59□□□□□ -0.55
CKS1B-202ENST00000368436 DHRS2Q13268 280 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
CKS1B-202ENST00000368436 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 RAB40CQ96S21 281 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 CACNG5Q9UF02 275 aa11.59□□□□□ -0.55
CKS1B-202ENST00000368436 ELOA3CA0A087WX78 387 aaPredicted RBP11.58□□□□□ -0.56
CKS1B-202ENST00000368436 CRYM-AS1A6NIL9 109 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 SMIM18P0DKX4 95 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 OR10J1P30954 320 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
CKS1B-202ENST00000368436 GPR107Q5VW38 600 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 FAAP20Q6NZ36 180 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 SLC24A4Q8NFF2 622 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
CKS1B-202ENST00000368436 GPR132Q9UNW8 380 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 TMEM56-RWDD3S4R434 201 aa11.58□□□□□ -0.56
CKS1B-202ENST00000368436 TRAV10A0A0B4J240 114 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 DISC1C4P0D8 188 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 TMEM268Q5VZI3 342 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 Q6ZTC4 211 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 TBC1D24Q9ULP9 559 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 HERC2O95714 4834 aa11.57□□□□□ -0.56
CKS1B-202ENST00000368436 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 FAM90A26D6RGX4 464 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 CTDSP2O14595 271 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 BUB3O43684 328 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 NXPH3O95157 252 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 NMSQ5H8A3 153 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 ETFRF1Q6IPR1 90 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 SMIM4Q8WVI0 70 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 CACFD1Q9UGQ2 172 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 HECTD4Q9Y4D8 3996 aa11.56□□□□□ -0.56
CKS1B-202ENST00000368436 CTDSPLO15194 276 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 RGS5O15539 181 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 TOMM40O96008 361 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 IL4P05112 153 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 AKAIN1P0CW23 69 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 NPY1RP25929 384 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 NOXA1Q86UR1 476 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 OR4C16Q8NGL9 310 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 NPIPB3Q92617 1050 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 IL22RA2Q969J5 263 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 NRN1Q9NPD7 142 aa11.55□□□□□ -0.56
CKS1B-202ENST00000368436 IGHV4-4A0A075B6R2 117 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 H3BMM0 161 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 RD3LP0DJH9 198 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 SULT1A3P0DMM9 295 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 SULT1A4P0DMN0 295 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 SNRPD3P62318 126 aaKnown RBP11.54□□□□□ -0.56
CKS1B-202ENST00000368436 PRRT1Q99946 306 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 RNF126Q9BV68 326 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 CELA1Q9UNI1 258 aa11.54□□□□□ -0.56
CKS1B-202ENST00000368436 GSTZ1O43708 216 aaPredicted RBP11.53□□□□□ -0.56
CKS1B-202ENST00000368436 PSG1P11464 419 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 NUTF2P61970 127 aaKnown RBP11.53□□□□□ -0.56
CKS1B-202ENST00000368436 SPCS2Q15005 226 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 C12orf74Q32Q52 190 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 SIGLEC15Q6ZMC9 328 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 CENPSQ8N2Z9 138 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 OR51S1Q8NGJ8 323 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 ACY3Q96HD9 319 aa11.53□□□□□ -0.56
CKS1B-202ENST00000368436 RABL2AQ9UBK7 228 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms