RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TBR1Q16650 682 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 LINC00305Q7Z4B0 112 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
CD48-201ENST00000368045 TNCP24821 2201 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 SHISA9B4DS77 424 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 SPINK4O60575 86 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 CRYGBP07316 175 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 SRIP30626 198 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 CA7P43166 264 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 COMPP49747 757 aaPredicted RBP11.48□□□□□ -0.57
CD48-201ENST00000368045 PRRX1P54821 245 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 CASP6P55212 293 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 PLP1P60201 277 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 OR4B1Q8NGF8 309 aa11.48□□□□□ -0.57
CD48-201ENST00000368045 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
CD48-201ENST00000368045 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 A0A1W2PS18 150 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 C22orf46C9J442 243 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 ZNF324O75467 553 aaPredicted RBP11.47□□□□□ -0.57
CD48-201ENST00000368045 RBP4P02753 201 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 CDKN1AP38936 164 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 UBE2G1P62253 170 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 NUDT10Q8NFP7 164 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 TSKUQ8WUA8 353 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 NUDT11Q96G61 164 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 ABHD17AQ96GS6 310 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 LINC00479Q96M42 142 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 C7orf69Q9H7B7 122 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 FBXL7Q9UJT9 491 aa11.47□□□□□ -0.57
CD48-201ENST00000368045 TBL2Q9Y4P3 447 aaKnown RBP11.47□□□□□ -0.57
CD48-201ENST00000368045 E7EQL1 145 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 ENSAO43768 121 aaKnown RBP11.46□□□□□ -0.57
CD48-201ENST00000368045 HYPMO75409 117 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 AMTP48728 403 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 SLC35B1P78383 322 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 C19orf35Q6ZS72 473 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 DMRTC2Q8IXT2 367 aaPredicted RBP11.46□□□□□ -0.57
CD48-201ENST00000368045 C11orf42Q8N5U0 333 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 RBM14Q96PK6 669 aaKnown RBP11.46□□□□□ -0.57
CD48-201ENST00000368045 NRN1Q9NPD7 142 aa11.46□□□□□ -0.57
CD48-201ENST00000368045 EP300Q09472 2414 aaPredicted RBP11.46□□□□□ -0.57
CD48-201ENST00000368045 B9A039 149 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 TCAPO15273 167 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 IGLV1-47P01700 117 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 SLC25A5P05141 298 aaKnown RBP11.46□□□□□ -0.58
CD48-201ENST00000368045 CD33P20138 364 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 APOBEC3AP31941 199 aaPredicted RBP11.46□□□□□ -0.58
CD48-201ENST00000368045 KLF5Q13887 457 aaPredicted RBP11.46□□□□□ -0.58
CD48-201ENST00000368045 KIAA1644Q3SXP7 199 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 CT83Q5H943 113 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 Q8NA96 180 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 NHLRC2Q8NBF2 726 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 VN1R17PQ8TDU5 208 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 FAM168AQ92567 244 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 GPR82Q96P67 336 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 RALYQ9UKM9 306 aaKnown RBP11.46□□□□□ -0.58
CD48-201ENST00000368045 SIGLEC9Q9Y336 463 aa11.46□□□□□ -0.58
CD48-201ENST00000368045 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
CD48-201ENST00000368045 IGHV2-26A0A0B4J1V2 119 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 DIRC3C9JPN6 131 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 OR2J3O76001 311 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 ORM2P19652 201 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 MFAP2P55001 183 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 KRTDAPP60985 99 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 TNXAQ16473 311 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
CD48-201ENST00000368045 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 OR1B1Q8NGR6 318 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 FMC1Q96HJ9 113 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 RITA1Q96K30 269 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 TMEM68Q96MH6 324 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 NEU1Q99519 415 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 RNF5Q99942 180 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 SRSF8Q9BRL6 282 aaKnown RBP11.45□□□□□ -0.58
CD48-201ENST00000368045 ATG101Q9BSB4 218 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
CD48-201ENST00000368045 F11RQ9Y624 299 aaKnown RBP11.45□□□□□ -0.58
CD48-201ENST00000368045 SOX21Q9Y651 276 aaPredicted RBP11.45□□□□□ -0.58
CD48-201ENST00000368045 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 TOMM40O96008 361 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
CD48-201ENST00000368045 IGHV3-48P01763 117 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 RBPJQ06330 500 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 TCF15Q12870 199 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 Q8N976 141 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 C8orf46Q8TAG6 207 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 RCHY1Q96PM5 261 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 MLST8Q9BVC4 326 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 SSBP3Q9BWW4 388 aaPredicted RBP11.44□□□□□ -0.58
CD48-201ENST00000368045 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 PGPA6NDG6 321 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 MOSP00540 346 aa11.44□□□□□ -0.58
CD48-201ENST00000368045 GP9P14770 177 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms