RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 IER3P46695 156 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 PPOXP50336 477 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 RPS16P62249 146 aaKnown RBP9.36□□□□□ -0.91
USF1-201ENST00000368019 C2orf83Q53S99 150 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 ZNF826PQ6ZT77 177 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 CD177Q8N6Q3 437 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 TMEM190Q8WZ59 177 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 SMIM12Q96EX1 92 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 GNB4Q9HAV0 340 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
USF1-201ENST00000368019 IGHV3-43A0A0B4J1X8 118 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 RNF223E7ERA6 249 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 TIMM8AO60220 97 aaPredicted RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 ZNF324O75467 553 aaPredicted RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 IGHV3-43DP0DP04 118 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 CDKN1AP38936 164 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 SUMO1P63165 101 aaKnown RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 MRPS11P82912 194 aaKnown RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 PRCDQ00LT1 54 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 KLF5Q13887 457 aaPredicted RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 C3orf36Q3SXR2 165 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 OR8I2Q8N0Y5 310 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 MAPK1IP1LQ8NDC0 245 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 OR4P4Q8NGL7 312 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 OR1L8Q8NGR8 309 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 VN1R17PQ8TDU5 208 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 LRRC29Q8WV35 223 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 IGF2BP2-AS1Q96M15 143 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 NABP2Q9BQ15 211 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 SEPSECSQ9HD40 501 aaKnown RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 C1RLQ9NZP8 487 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 MRPS16Q9Y3D3 137 aaKnown RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 TBL2Q9Y4P3 447 aaKnown RBP9.35□□□□□ -0.91
USF1-201ENST00000368019 CUBNO60494 3623 aa9.35□□□□□ -0.91
USF1-201ENST00000368019 TET2Q6N021 2002 aaPredicted RBP9.34□□□□□ -0.91
USF1-201ENST00000368019 DPRXA6NFQ7 191 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 SLC17A3O00476 420 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 IGLV2-8P01709 118 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 IGLC2P0DOY2 106 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 IGLC3P0DOY3 106 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 AMTP48728 403 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
USF1-201ENST00000368019 OR4A47Q6IF82 309 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 CACNG8Q8WXS5 425 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 ZNF714Q96N38 554 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 OR2V2Q96R30 315 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 LINC00574Q9H8X3 128 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 CALYQ9NYX4 217 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 IDI2-AS1Q9NZ38 188 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 METRNQ9UJH8 293 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 CDC42EP3Q9UKI2 254 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 PAM16Q9Y3D7 125 aa9.34□□□□□ -0.91
USF1-201ENST00000368019 A0A1W2PS18 150 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 BMPR1BO00238 502 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 UPK2O00526 184 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 OR2J3O76001 311 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 CA2P00918 260 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 IGHV4-39P01824 125 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 CD3EP07766 207 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 C8orf88P0DMB2 117 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 SELENOVP59797 346 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 PSG5Q15238 335 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 SPATA31B1PQ5VZV4 182 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 FAM53AQ6NSI3 398 aaPredicted RBP9.33□□□□□ -0.92
USF1-201ENST00000368019 MIR17HGQ75NE6 70 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 ATP5L2Q7Z4Y8 100 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 SSMEM1Q8WWF3 244 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 FAM234AQ9H0X4 552 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 PLEKHA3Q9HB20 300 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 NGBQ9NPG2 151 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 BET1LQ9NYM9 111 aa9.33□□□□□ -0.92
USF1-201ENST00000368019 DOCK11Q5JSL3 2073 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 ARFGEF3Q5TH69 2177 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 MALRD1Q5VYJ5 2156 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 IGKV1D-17A0A075B6S4 117 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 TRAV3A0A0B4J244 114 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 CD5LO43866 347 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 NDUFS7O75251 213 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 BSPH1Q075Z2 132 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 IBA57Q5T440 356 aaKnown RBP9.32□□□□□ -0.92
USF1-201ENST00000368019 DTX2Q86UW9 622 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 NIT1Q86X76 327 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 ZNF439Q8NDP4 499 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 OR2D3Q8NGH3 330 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 RFESDQ8TAC1 157 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 GRAMD2BQ96HH9 432 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 ZNF331Q9NQX6 463 aaPredicted RBP9.32□□□□□ -0.92
USF1-201ENST00000368019 SLC35D1Q9NTN3 355 aa9.32□□□□□ -0.92
USF1-201ENST00000368019 SOX21Q9Y651 276 aaPredicted RBP9.32□□□□□ -0.92
USF1-201ENST00000368019 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.32□□□□□ -0.922e-8■■■■■ 31.6
USF1-201ENST00000368019 A0A096LNT2 108 aa9.31□□□□□ -0.92
USF1-201ENST00000368019 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms