RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PCDH15Q96QU1 1955 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 PCNX3Q9H6A9 2034 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 IL18BPO95998 194 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHG3P01860 377 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 C8orf88P0DMB2 117 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 LMO1P25800 156 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 TSPOP30536 169 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SLC25A10Q9UBX3 287 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 FAM181BA6NEQ2 426 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 CD5LO43866 347 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 GNB1LQ9BYB4 327 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 SS18L2Q9UHA2 77 aa4.48□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF585BQ52M93 769 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 BOD1L2Q8IYS8 172 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 ITLN1Q8WWA0 313 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 GPHA2Q96T91 129 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRGV8A0A0C4DH27 118 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 FNDC10F2Z333 226 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 NKX2-8O15522 239 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 SFTA2Q6UW10 78 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 CHCHD1Q96BP2 118 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 MGST2Q99735 147 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 HGFACQ04756 655 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 SPSB3Q6PJ21 355 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 OR9G4Q8NGQ1 327 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 CACNG8Q8WXS5 425 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 CD59P13987 128 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 SSTR5P35346 364 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 LGALS7P47929 136 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 ATP5G3P48201 142 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 POLR3KQ9Y2Y1 108 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 CECR9P0C854 216 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 FDCSPQ8NFU4 85 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 TSSC4Q9Y5U2 329 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 C17orf98A8MV24 154 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 C3orf36Q3SXR2 165 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 FER1L6-AS1Q8NA97 138 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRAV8-1A0A0A6YYK1 113 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 PPP1R17O96001 155 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 CD3EP07766 207 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 RPL31P62899 125 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 MORN2Q502X0 79 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 MPV17L2Q567V2 206 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 KHDC1LQ5JSQ8 128 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMEM170BQ5T4T1 132 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 SPRR3Q9UBC9 169 aa4.47□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRBV20OR9-2A0A075B6H5 130 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGHV2OR16-5A0A0B4J2B6 119 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 A0A1W2PRD5 423 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 A0A1W2PRF3 423 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 A0A1W2PRM7 423 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 CCL20P78556 96 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF562Q6V9R5 426 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 TPRX1Q8N7U7 411 aa4.46□□□□□ -1.69
CDC42BPA-204ENST00000366767 RND2P52198 227 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 MFAP4P55083 255 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 RPL8P62917 257 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM144Q7Z5S9 345 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 WFDC3Q8IUB2 231 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 RNASEH2CQ8TDP1 164 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 NABP2Q9BQ15 211 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 MUC21A0A0G2JKD1 596 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 MUC21A0A140T8X8 626 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 IL6RP08887 468 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 WDR82Q6UXN9 313 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 SYT8Q8NBV8 401 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 OR13A1Q8NGR1 328 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 SCNM1Q9BWG6 230 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 RAB1BQ9H0U4 201 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 RPP21Q9H633 154 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 COL6A6A6NMZ7 2263 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 KIR3DS1Q14943 382 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 INSIG2Q9Y5U4 225 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 A0A087X0K7 114 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 C15orf61A6NNL5 157 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 PSG9Q00887 426 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM105Q8N8V8 129 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 ZDHHC16Q969W1 377 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGHV3OR15-7A0A075B7D8 119 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 DUTP33316 252 aaKnown RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 ABHD12Q8N2K0 398 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM171Q8WVE6 324 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 CCL17Q92583 94 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 SCGB3A1Q96QR1 104 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 LY96Q9Y6Y9 160 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGHV3-21A0A0B4J1V1 117 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKV1-5P01602 117 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 IGKCP01834 107 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 LEPP41159 167 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 CX3CL1P78423 397 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 TEX38Q6PEX7 206 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 GPR82Q96P67 336 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 KLF2Q9Y5W3 355 aaPredicted RBP4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 NOTCH4Q99466 2003 aa4.46□□□□□ -1.7
CDC42BPA-204ENST00000366767 SRRM5B3KS81 715 aa4.45□□□□□ -1.7
CDC42BPA-204ENST00000366767 NPIPB6E9PJ23 425 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms