RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LY6EQ16553 131 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 C9orf40Q8IXQ3 194 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 PLPPR1Q8TBJ4 325 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 SPANXCQ9NY87 97 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 TOMM40O96008 361 aa11.15□□□□□ -0.62
SRGAP3-201ENST00000360413 TEX45Q8NA69 505 aa11.15□□□□□ -0.63
SRGAP3-201ENST00000360413 KLF14Q8TD94 323 aaPredicted RBP11.15□□□□□ -0.63
SRGAP3-201ENST00000360413 COLCA2A8K830 154 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 ABHD17AQ96GS6 310 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 CXCL1P09341 107 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 DRAM1Q8N682 238 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 A0A087WX48 190 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 RNASE4P34096 147 aaKnown RBP11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 NRTNQ99748 197 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 TMEM92Q6UXU6 159 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 ADARB2-AS1A8MUL3 147 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 FABP5P3A8MUU1 101 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 C5orf67F2Z3F1 127 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 Q9H3A6 140 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 ANAPC1Q9H1A4 1944 aa11.14□□□□□ -0.63
SRGAP3-201ENST00000360413 EVI2AP22794 236 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 ASPHD2Q6ICH7 369 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 CRIM1Q9NZV1 1036 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 TMEM131Q92545 1883 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 IFI27L1Q96BM0 104 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 FRMPD3Q5JV73 1810 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 PRR19A6NJB7 356 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 H3BMM0 161 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 PVRIGQ6DKI7 326 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 LILRA6Q6PI73 481 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 PPP1R27Q86WC6 154 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 RBMY1FQ15415 496 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 GUSBP1Q15486 140 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 HS3ST3B1Q9Y662 390 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 A0A1W2PRE2 83 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 FOXL1Q12952 345 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 CHAC1Q9BUX1 264 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHV3-64A0A075B6Q5 118 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 IGKV1D-16P01601 117 aa11.13□□□□□ -0.63
SRGAP3-201ENST00000360413 TCF20Q9UGU0 1960 aaKnown RBP11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 MPV17L2Q567V2 206 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 ZNF826PQ6ZT77 177 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 TMEM242Q9NWH2 141 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 CD7P09564 240 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 CCL20P78556 96 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 TANC2Q9HCD6 1990 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 SLC25A28Q96A46 364 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 CCL4P13236 92 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 PSG3Q16557 428 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 MIR17HGQ75NE6 70 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 NPC2P61916 151 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 PYY3Q5JQD4 70 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 DTX4Q9Y2E6 619 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 HCFC1P51610 2035 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 CELA2BP08218 269 aaPredicted RBP11.12□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHMP01871 453 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 OTORQ9NRC9 128 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 MESP2Q0VG99 397 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 LIMS2Q7Z4I7 341 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 RTBDNQ9BSG5 229 aaPredicted RBP11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 LTBP4Q8N2S1 1624 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 COL9A1P20849 921 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 FAM166AQ6J272 317 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 LAMTOR3Q9UHA4 124 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 LHFPL6Q9Y693 200 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 INAFM2P0DMQ5 153 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 METRNQ9UJH8 293 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 LEPROTO15243 131 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 OSTCQ9NRP0 149 aa11.11□□□□□ -0.63
SRGAP3-201ENST00000360413 IGHV3-35A0A0C4DH35 117 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 LINC00312Q9Y6C7 94 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 IGKV1D-42A0A075B6H8 117 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 SONP18583 2426 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 TMEM14DPA8MWL7 114 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 PRR32B1ATL7 298 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 HTN3P15516 51 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 ZNF664Q8N3J9 261 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 ATP5L2Q7Z4Y8 100 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 PRRC2AP48634 2157 aaKnown RBP11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 FAM90A9PA6NNJ1 464 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 F8VVB4 439 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 F8VWA3 439 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 MLNRO43193 412 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 RHOGP84095 191 aa11.1□□□□□ -0.63
SRGAP3-201ENST00000360413 LHX2P50458 406 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 GNG5P63218 68 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 OVOL1O14753 267 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 IFITM1P13164 125 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 NEUROG3Q9Y4Z2 214 aa11.09□□□□□ -0.63
SRGAP3-201ENST00000360413 MALRD1Q5VYJ5 2156 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms