RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 EDDM3BP56851 147 aa8.25□□□□□ -1.09
SYNE1-203ENST00000354674 CENPVQ7Z7K6 275 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-203ENST00000354674 OR8B3Q8NGG8 313 aa8.25□□□□□ -1.09
SYNE1-203ENST00000354674 SSBP3Q9BWW4 388 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-203ENST00000354674 C11orf1Q9H5F2 150 aa8.25□□□□□ -1.09
SYNE1-203ENST00000354674 PEF1Q9UBV8 284 aaKnown RBP8.25□□□□□ -1.09
SYNE1-203ENST00000354674 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
SYNE1-203ENST00000354674 HRNRQ86YZ3 2850 aaPredicted RBP8.25□□□□□ -1.09
SYNE1-203ENST00000354674 IGKV1D-17A0A075B6S4 117 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 PSG2P11465 335 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 MMD2Q8IY49 270 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 ZNF295-AS1Q8N0V1 137 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 CD177Q8N6Q3 437 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 TAF15Q92804 592 aaKnown RBP eCLIP8.24□□□□□ -1.09
SYNE1-203ENST00000354674 SAP30LQ9HAJ7 183 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 DYNLRB1Q9NP97 96 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 DECR2Q9NUI1 292 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 ZFYVE26Q68DK2 2539 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 RPL8P62917 257 aaKnown RBP8.24□□□□□ -1.09
SYNE1-203ENST00000354674 CCDC144NLQ6NUI1 221 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 ZNF497Q6ZNH5 498 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 CCDC71LQ8N9Z2 235 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 IL1F10Q8WWZ1 152 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 SPIN2AQ99865 258 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 SPIN2BQ9BPZ2 258 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 A6NJY4 79 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 CHEK1O14757 476 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 PSPNO60542 156 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 SCTP09683 121 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 PRDX2P32119 198 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 CAMPP49913 170 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 FOXA3P55318 350 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-203ENST00000354674 YPEL3P61236 119 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-203ENST00000354674 RAB31Q13636 194 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 NEU4Q8WWR8 484 aaPredicted RBP8.24□□□□□ -1.09
SYNE1-203ENST00000354674 RDH5Q92781 318 aa8.24□□□□□ -1.09
SYNE1-203ENST00000354674 TMEM178BH3BS89 294 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 FSTL3O95633 263 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 SLC25A6P12236 298 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 VDAC1P21796 283 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 CEBPDP49716 269 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-203ENST00000354674 ID3Q02535 119 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 FOXL1Q12952 345 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 SLC25A34Q6PIV7 304 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 OR4P4Q8NGL7 312 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 FAM181BA6NEQ2 426 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 BMPR1BO00238 502 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 TNFRSF13BO14836 293 aaPredicted RBP8.23□□□□□ -1.09
SYNE1-203ENST00000354674 ZNF138P52744 262 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 SLC38A11Q08AI6 406 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 OR1L1Q8NH94 360 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 MBNL3Q9NUK0 354 aaKnown RBP8.23□□□□□ -1.09
SYNE1-203ENST00000354674 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
SYNE1-203ENST00000354674 ZNF462Q96JM2 2506 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 LRRC30A6NM36 301 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 K7EN84 100 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 UBE2G1P62253 170 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 HSD52Q0P140 79 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 VWC2Q2TAL6 325 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 MRPL27Q9P0M9 148 aaKnown RBP8.22□□□□□ -1.09
SYNE1-203ENST00000354674 OR51B2Q9Y5P1 312 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 ARFGEF3Q5TH69 2177 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 OOEPA6NGQ2 149 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 ISLRO14498 428 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 SLC35E4Q6ICL7 350 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 SH2D6Q7Z4S9 175 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 BOD1L2Q8IYS8 172 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 KCNS2Q9ULS6 477 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 SPCS1Q9Y6A9 102 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 IGHV3OR15-7A0A075B7D8 119 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 C17orf112F2Z3M2 114 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 LRRC75BQ2VPJ9 315 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 TMEM95Q3KNT9 176 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 FAM201AQ5SY85 155 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 OR2K2Q8NGT1 345 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 OR5B3Q8NH48 314 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 IGFBPL1Q8WX77 278 aa8.22□□□□□ -1.09
SYNE1-203ENST00000354674 SYNGR2O43760 224 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 TFF1P04155 84 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 OR10J4P0C629 311 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 HTR1DP28221 377 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 ARF6P62330 175 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 MOB1BQ7L9L4 216 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 COQ2Q96H96 371 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 OR1A1Q9P1Q5 309 aa8.21□□□□□ -1.09
SYNE1-203ENST00000354674 FLNCQ14315 2725 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 DOPEY1Q5JWR5 2465 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 LTC4SQ16873 150 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 LRTM2Q8N967 370 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 OR10AG1Q8NH19 301 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 CACNG8Q8WXS5 425 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 NINJ1Q92982 152 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 GAFA1Q96PS6 74 aa8.21□□□□□ -1.1
SYNE1-203ENST00000354674 AESQ08117 197 aa8.2□□□□□ -1.1
SYNE1-203ENST00000354674 RPEL1Q2QD12 228 aa8.2□□□□□ -1.1
SYNE1-203ENST00000354674 CR1LQ2VPA4 569 aa8.2□□□□□ -1.1
SYNE1-203ENST00000354674 NMSQ5H8A3 153 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms