RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 OR1S2Q8NGQ3 325 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 MIXL1Q9H2W2 232 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 APLNQ9ULZ1 77 aa10.49□□□□□ -0.73
PRPF40A-201ENST00000354363 HECTD4Q9Y4D8 3996 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 TEX13DA0A0J9YY54 714 aaPredicted RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 ZNF705EA8MWA4 302 aaPredicted RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 IGLL5B9A064 214 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 C11orf94C9JXX5 98 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 SMIM18P0DKX4 95 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 MIFP14174 115 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 RND2P52198 227 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 C2orf83Q53S99 150 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 SELENOHQ8IZQ5 122 aaKnown RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 GLMPQ8WWB7 406 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 RBPMSQ93062 196 aaKnown RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 GPR146Q96CH1 333 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 NAA60Q9H7X0 242 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 HEYLQ9NQ87 328 aaPredicted RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 CACNG5Q9UF02 275 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 C14orf166Q9Y224 244 aaKnown RBP10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 X6R8D5 127 aa10.48□□□□□ -0.73
PRPF40A-201ENST00000354363 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.734e-6■■■□□ 18.4
PRPF40A-201ENST00000354363 SLC25A4P12235 298 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 DHRS2Q13268 280 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 MEF2DQ14814 521 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 ACTL10Q5JWF8 245 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 GPR107Q5VW38 600 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 Q8WTZ3 238 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 HERC2O95714 4834 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 ELOA3CA0A087WX78 387 aaPredicted RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 HELTA6NFD8 242 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 HLA-DMBP28068 263 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 OR10J1P30954 320 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 EIF2B2P49770 351 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 DHODHQ02127 395 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 SURF2Q15527 256 aaPredicted RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 SLC24A4Q8NFF2 622 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 TMEM170AQ8WVE7 144 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
PRPF40A-201ENST00000354363 CRYM-AS1A6NIL9 109 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 CEBPZOSA8MTT3 80 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 MRPS10P82664 201 aaKnown RBP10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 PSMG4Q5JS54 123 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 TMEM268Q5VZI3 342 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 RAB40CQ96S21 281 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 GPR132Q9UNW8 380 aa10.46□□□□□ -0.74
PRPF40A-201ENST00000354363 DISC1C4P0D8 188 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 CTDSP2O14595 271 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 RGS5O15539 181 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 NXPH3O95157 252 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 AP2S1P53680 142 aaPredicted RBP10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 USF2Q15853 346 aaPredicted RBP10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 Q6ZTC4 211 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 OR4C16Q8NGL9 310 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 SMIM4Q8WVI0 70 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 NPIPB3Q92617 1050 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 TBC1D24Q9ULP9 559 aa10.45□□□□□ -0.74
PRPF40A-201ENST00000354363 TRAV10A0A0B4J240 114 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 IL4P05112 153 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 NPY1RP25929 384 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 ETFRF1Q6IPR1 90 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 TOMM40O96008 361 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 AKAIN1P0CW23 69 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 CELA1Q9UNI1 258 aa10.44□□□□□ -0.74
PRPF40A-201ENST00000354363 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 BUB3O43684 328 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 SULT1A3P0DMM9 295 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 SULT1A4P0DMN0 295 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 SPCS2Q15005 226 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 NMSQ5H8A3 153 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 NOXA1Q86UR1 476 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 OR51S1Q8NGJ8 323 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 IL22RA2Q969J5 263 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 ACY3Q96HD9 319 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 PRRT1Q99946 306 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 SEPSECSQ9HD40 501 aaKnown RBP10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 NRN1Q9NPD7 142 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
PRPF40A-201ENST00000354363 CTDSPLO15194 276 aa10.42□□□□□ -0.74
PRPF40A-201ENST00000354363 GSTZ1O43708 216 aaPredicted RBP10.42□□□□□ -0.74
PRPF40A-201ENST00000354363 RD3LP0DJH9 198 aa10.42□□□□□ -0.74
PRPF40A-201ENST00000354363 SIGLEC15Q6ZMC9 328 aa10.42□□□□□ -0.74
PRPF40A-201ENST00000354363 CACFD1Q9UGQ2 172 aa10.42□□□□□ -0.74
PRPF40A-201ENST00000354363 H3BMM0 161 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 IFNA10P01566 189 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 PSG1P11464 419 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 IL18Q14116 193 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 C12orf74Q32Q52 190 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 GPR141Q7Z602 305 aa10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 CLVS1Q8IUQ0 354 aaPredicted RBP10.41□□□□□ -0.74
PRPF40A-201ENST00000354363 CENPSQ8N2Z9 138 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms