RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 CEACAM3P40198 252 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 HIST1H1AQ02539 215 aaPredicted RBP12.4□□□□□ -0.42
PTBP1-201ENST00000349038 MPDU1O75352 247 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 P0C879 139 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 AREGP15514 252 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 TMEM177Q53S58 311 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 TIMM23BQ5SRD1 257 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 C18orf15Q96N68 181 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 TXNDC17Q9BRA2 123 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 DMXL2Q8TDJ6 3036 aa12.4□□□□□ -0.42
PTBP1-201ENST00000349038 IGLV2-8P01709 118 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 OR1C1Q15619 314 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 MDP1Q86V88 176 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 PKIBQ9C010 78 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 NCOR1P1Q9H4R4 102 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 SMIM27A0A1W2PRY6 76 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 G3V4G9 280 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 APOHP02749 345 aaPredicted RBP12.39□□□□□ -0.43
PTBP1-201ENST00000349038 C1orf159Q96HA4 380 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 MRPL27Q9P0M9 148 aaKnown RBP12.39□□□□□ -0.43
PTBP1-201ENST00000349038 MED13Q9UHV7 2174 aa12.39□□□□□ -0.43
PTBP1-201ENST00000349038 IGKV1OR2-108A0A075B7D4 117 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 LYZL6O75951 148 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 FAM201AQ5SY85 155 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 ZNRF1Q8ND25 227 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 SLC25A40Q8TBP6 338 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 SAP25Q8TEE9 199 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 COQ2Q96H96 371 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 SRSF8Q9BRL6 282 aaKnown RBP12.38□□□□□ -0.43
PTBP1-201ENST00000349038 MPC1Q9Y5U8 109 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 OOEPA6NGQ2 149 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 ADH4P08319 380 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 ACP1P24666 158 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 MAGEA5P43359 124 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 LGALS7P47929 136 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 TNFRSF14Q92956 283 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 SMG1Q96Q15 3661 aaKnown RBP12.38□□□□□ -0.43
PTBP1-201ENST00000349038 PGPA6NDG6 321 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 COX7A2P2O60397 106 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 PROP1O75360 226 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 SH2D6Q7Z4S9 175 aa12.38□□□□□ -0.43
PTBP1-201ENST00000349038 COL25A1Q9BXS0 654 aaPredicted RBP12.38□□□□□ -0.43
PTBP1-201ENST00000349038 NBASA2RRP1 2371 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 AGFG2O95081 481 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 REG1AP05451 166 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 TAS2R45P59539 299 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 SSBP2P81877 361 aaPredicted RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 AMTNQ6UX39 209 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 SH3BGRL2Q9UJC5 107 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 MRPS17Q9Y2R5 130 aaKnown RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 C22orf46C9J442 243 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 J3QR06 171 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 FAM106CPP0CH98 169 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 REG1BP48304 166 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 HBBP68871 147 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 RBPJQ06330 500 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 FAM106AQ4KMX7 169 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 Q71RC1 249 aaPredicted RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 SCRT2Q9NQ03 307 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 MBNL3Q9NUK0 354 aaKnown RBP12.37□□□□□ -0.43
PTBP1-201ENST00000349038 ATMQ13315 3056 aa12.37□□□□□ -0.43
PTBP1-201ENST00000349038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
PTBP1-201ENST00000349038 P01737 135 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 RAB9AP51151 201 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 PLGLB1Q02325 96 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 Q0VFX4 171 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 FA2HQ7L5A8 372 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 LOXL2Q9Y4K0 774 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 SPENQ96T58 3664 aaKnown RBP12.36□□□□□ -0.43
PTBP1-201ENST00000349038 LINC00322Q6ZN03 302 aaPredicted RBP12.36□□□□□ -0.43
PTBP1-201ENST00000349038 RBMXL3Q8N7X1 1067 aaKnown RBP12.36□□□□□ -0.43
PTBP1-201ENST00000349038 C1RLQ9NZP8 487 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 A6NDN8 102 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 MOSP00540 346 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 CACNG7P62955 275 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 EIF4EBP1Q13541 118 aaPredicted RBP12.36□□□□□ -0.43
PTBP1-201ENST00000349038 PSG3Q16557 428 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 PAXXQ9BUH6 204 aa12.36□□□□□ -0.43
PTBP1-201ENST00000349038 TRAV26-1A0A087WT03 109 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 C8orf88P0DMB2 117 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 FABP2P12104 132 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 COL8A1P27658 744 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 FOLR3P41439 243 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 ATP5G2Q06055 141 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 ETDBQ3ZM63 59 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 COX19Q49B96 90 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 SIGMAR1Q99720 223 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 HSPB8Q9UJY1 196 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 A8MWL6 223 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 C11orf52Q96A22 123 aa12.35□□□□□ -0.43
PTBP1-201ENST00000349038 OR51B2Q9Y5P1 312 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms