RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 TRAV30A0A087WSZ9 112 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 DEFB131AP59861 70 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 LEMD1Q68G75 181 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 LGALS9CQ6DKI2 356 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 STXBP6Q8NFX7 210 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 OR52E5Q8NH55 327 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 ZFAND3Q9H8U3 227 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 PTTG2Q9NZH5 202 aa9.15□□□□□ -0.94
SGCA-202ENST00000344627 AGRNO00468 2067 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 GSTZ1O43708 216 aaPredicted RBP9.14□□□□□ -0.95
SGCA-202ENST00000344627 SULT1A3P0DMM9 295 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 SULT1A4P0DMN0 295 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 TNFSF8P32971 234 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 RND2P52198 227 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 EWSR1Q01844 656 aaKnown RBP eCLIP9.14□□□□□ -0.95
SGCA-202ENST00000344627 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 STHQ8IWL8 128 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 Q8WTZ3 238 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 GRAMD2BQ96HH9 432 aa9.14□□□□□ -0.95
SGCA-202ENST00000344627 SLIRPQ9GZT3 109 aaKnown RBP9.14□□□□□ -0.95
SGCA-202ENST00000344627 TRAV2A0A0B4J234 112 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 CA1P00915 261 aaPredicted RBP9.13□□□□□ -0.95
SGCA-202ENST00000344627 IFNA10P01566 189 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 OR10J1P30954 320 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 P2RY1P47900 373 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 TMEM187Q14656 261 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 CNPY1Q3B7I2 92 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 C2orf83Q53S99 150 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 PYDC2Q56P42 97 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 TMEM41BQ5BJD5 291 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 SLC24A4Q8NFF2 622 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 OR1S2Q8NGQ3 325 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 RNASEH2CQ8TDP1 164 aaKnown RBP9.13□□□□□ -0.95
SGCA-202ENST00000344627 ACY3Q96HD9 319 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 RARRES2Q99969 163 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 C11orf68Q9H3H3 251 aaKnown RBP9.13□□□□□ -0.95
SGCA-202ENST00000344627 TMEM56-RWDD3S4R434 201 aa9.13□□□□□ -0.95
SGCA-202ENST00000344627 IGKV1-17P01599 117 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 IFNA4P05014 189 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 SLC25A4P12235 298 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 ANXA3P12429 323 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 NPY1RP25929 384 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 CRYBB3P26998 211 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 FAUP35544 74 aaKnown RBP9.12□□□□□ -0.95
SGCA-202ENST00000344627 EIF2B2P49770 351 aaKnown RBP9.12□□□□□ -0.95
SGCA-202ENST00000344627 RBMS2Q15434 407 aaKnown RBP9.12□□□□□ -0.95
SGCA-202ENST00000344627 BSXQ3C1V8 233 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 ETFRF1Q6IPR1 90 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 TMED4Q7Z7H5 227 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 FAM24BQ8N5W8 94 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 OR11H2Q8NH07 326 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 PHLDA1Q8WV24 401 aaPredicted RBP9.12□□□□□ -0.95
SGCA-202ENST00000344627 NPIPB3Q92617 1050 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 CACFD1Q9UGQ2 172 aa9.12□□□□□ -0.95
SGCA-202ENST00000344627 ZNF688P0C7X2 276 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 CCR6P51684 374 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 SMCO1Q147U7 214 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 AARDQ4LEZ3 155 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 SPANXN2Q5MJ10 180 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 LYZL2Q7Z4W2 148 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 LGI3Q8N145 548 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 OR1S1Q8NH92 325 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 IL22RA2Q969J5 263 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 FBXL17Q9UF56 701 aa9.11□□□□□ -0.95
SGCA-202ENST00000344627 HNRNPCP07910 306 aaKnown RBP eCLIP9.1□□□□□ -0.95
SGCA-202ENST00000344627 IGLC1P0CG04 106 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 RD3LP0DJH9 198 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 AP3S2P59780 193 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 SRPXP78539 464 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 DHRS2Q13268 280 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 TOMM5Q8N4H5 51 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 C11orf45Q8TAV5 145 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 DTD1Q8TEA8 209 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 SOSTQ9BQB4 213 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 RBKSQ9H477 322 aa9.1□□□□□ -0.95
SGCA-202ENST00000344627 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
SGCA-202ENST00000344627 A0A0B4J2A0 478 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 HELTA6NFD8 242 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 C11orf94C9JXX5 98 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 K7EQG2 157 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 DEFB4AO15263 64 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 IL4P05112 153 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 VAMP1P23763 118 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 YPEL3P61236 119 aaPredicted RBP9.09□□□□□ -0.95
SGCA-202ENST00000344627 SUPT4H1P63272 117 aaKnown RBP9.09□□□□□ -0.95
SGCA-202ENST00000344627 NMSQ5H8A3 153 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 ACTL10Q5JWF8 245 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 TMEM170AQ8WVE7 144 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 S100ZQ8WXG8 99 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 HRH4Q9H3N8 390 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 SHPKQ9UHJ6 478 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 U3KQ87 197 aa9.09□□□□□ -0.95
SGCA-202ENST00000344627 AP2S1P53680 142 aaPredicted RBP9.08□□□□□ -0.96
SGCA-202ENST00000344627 NANOS2P60321 138 aaKnown RBP9.08□□□□□ -0.96
SGCA-202ENST00000344627 KLF9Q13886 244 aaPredicted RBP9.08□□□□□ -0.96
SGCA-202ENST00000344627 C16orf54Q6UWD8 224 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms