RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 RBMY1FQ15415 496 aaKnown RBP11.34□□□□□ -0.59
LINC01116-202ENST00000339037 Q6ZTC4 211 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 TRPT1Q86TN4 253 aaKnown RBP11.34□□□□□ -0.59
LINC01116-202ENST00000339037 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
LINC01116-202ENST00000339037 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
LINC01116-202ENST00000339037 TRAV10A0A0B4J240 114 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 CORTO00230 105 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 ATG12O94817 140 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 TMEM50AO95807 157 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 OR5AC1P0C628 307 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 RNASE2P10153 161 aaKnown RBP11.33□□□□□ -0.6
LINC01116-202ENST00000339037 SSBP1Q04837 148 aaKnown RBP11.33□□□□□ -0.6
LINC01116-202ENST00000339037 PVRIGQ6DKI7 326 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
LINC01116-202ENST00000339037 Q6ZRM9 215 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
LINC01116-202ENST00000339037 LHFPL5Q8TAF8 219 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 SMIM4Q8WVI0 70 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 GRAMD2BQ96HH9 432 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 METTL26Q96S19 204 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 PDCD10Q9BUL8 212 aa11.33□□□□□ -0.6
LINC01116-202ENST00000339037 IGHV4-4A0A075B6R2 117 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 ZNF705EA8MWA4 302 aaPredicted RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 K7EQG2 157 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 SCGB2A1O75556 95 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 C4BPBP20851 252 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 P2RY1P47900 373 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 HOXA1P49639 335 aaPredicted RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 SUB1P53999 127 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 MRPS10P82664 201 aaKnown RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 MEF2DQ14814 521 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 LINC00336Q6ZUF6 198 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 OR4C16Q8NGL9 310 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 RNASE11Q8TAA1 199 aaKnown RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 TMEM222Q9H0R3 208 aa11.32□□□□□ -0.6
LINC01116-202ENST00000339037 FNDC4Q9H6D8 234 aaPredicted RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 MRPL36Q9P0J6 103 aaKnown RBP11.32□□□□□ -0.6
LINC01116-202ENST00000339037 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 CDS2O95674 445 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 OPRK1P41145 380 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 IL18Q14116 193 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 DIRAS2Q96HU8 199 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 NAA60Q9H7X0 242 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 TBC1D24Q9ULP9 559 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 C14orf166Q9Y224 244 aaKnown RBP11.31□□□□□ -0.6
LINC01116-202ENST00000339037 X6R8D5 127 aa11.31□□□□□ -0.6
LINC01116-202ENST00000339037 DYNC1H1Q14204 4646 aaKnown RBP11.3□□□□□ -0.6
LINC01116-202ENST00000339037 CLN5O75503 358 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 B3GALNT1O75752 331 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 AKAIN1P0CW23 69 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 CRYBB3P26998 211 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 MLANAQ16655 118 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 BSXQ3C1V8 233 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 DCANP1Q8TF63 244 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 RAB2BQ8WUD1 216 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 TMEM230Q96A57 120 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 RNF126Q9BV68 326 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 CLEC5AQ9NY25 188 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 CCDC59Q9P031 241 aaKnown RBP11.3□□□□□ -0.6
LINC01116-202ENST00000339037 DNAH11Q96DT5 4516 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 PKD1P98161 4303 aa11.3□□□□□ -0.6
LINC01116-202ENST00000339037 TEX13DA0A0J9YY54 714 aaPredicted RBP11.29□□□□□ -0.6
LINC01116-202ENST00000339037 DISC1C4P0D8 188 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 CTDSPLO15194 276 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 EIF2B2P49770 351 aaKnown RBP11.29□□□□□ -0.6
LINC01116-202ENST00000339037 SURF2Q15527 256 aaPredicted RBP11.29□□□□□ -0.6
LINC01116-202ENST00000339037 AARDQ4LEZ3 155 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 SELENOHQ8IZQ5 122 aaKnown RBP11.29□□□□□ -0.6
LINC01116-202ENST00000339037 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 RBPMSQ93062 196 aaKnown RBP11.29□□□□□ -0.6
LINC01116-202ENST00000339037 ENY2Q9NPA8 101 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 PFDN2Q9UHV9 154 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
LINC01116-202ENST00000339037 CRYM-AS1A6NIL9 109 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 AMBPP02760 352 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 TMBIM6P55061 237 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 SPCS3P61009 180 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 TMEM268Q5VZI3 342 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 FAM219AQ8IW50 185 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 CSNK1G2-AS1Q8NCQ2 148 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 OR51S1Q8NGJ8 323 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 GPR146Q96CH1 333 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.28□□□□□ -0.6
LINC01116-202ENST00000339037 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
LINC01116-202ENST00000339037 ABCA13Q86UQ4 5058 aa11.27□□□□□ -0.6
LINC01116-202ENST00000339037 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 ANKRD20A5PA0PJZ0 165 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 HELTA6NFD8 242 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 IGKV1-17P01599 117 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.61
LINC01116-202ENST00000339037 DHRS2Q13268 280 aa11.27□□□□□ -0.61
LINC01116-202ENST00000339037 PSMG4Q5JS54 123 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms