RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TGFAP01135 160 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 UBALD2Q8IYN6 164 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 UFC1Q9Y3C8 167 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 IGHV1-24A0A0C4DH33 117 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 A0A1W2PPM0 123 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 SPRY3O43610 288 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 VMA21Q3ZAQ7 101 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 WDR31Q8NA23 367 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 TMEM238LA0A1B0GVL6 79 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 TMEM189A5PLL7 270 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 A6NJY4 79 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 G3V4G9 280 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 TFF1P04155 84 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 KIR2DL2P43627 348 aaPredicted RBP13.74□□□□□ -0.21
PACS1-201ENST00000320580 GUSBP11Q6P575 273 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 MRAP2Q96G30 205 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 CHD7Q9P2D1 2997 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 ZNF146Q15072 292 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 PRSS57Q6UWY2 283 aa13.74□□□□□ -0.21
PACS1-201ENST00000320580 NCOA6Q14686 2063 aaPredicted RBP13.73□□□□□ -0.21
PACS1-201ENST00000320580 SMAD7O15105 426 aaKnown RBP13.73□□□□□ -0.21
PACS1-201ENST00000320580 CD46P15529 392 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 TRAV26-1A0A087WT03 109 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 DLL1O00548 723 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 SNCGO76070 127 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 MOSP00540 346 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 CEACAM3P40198 252 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 LINC00173Q6ZV60 143 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 CHCHD2Q9Y6H1 151 aaPredicted RBP13.73□□□□□ -0.21
PACS1-201ENST00000320580 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
PACS1-201ENST00000320580 CELA3BP08861 270 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 REG1BP48304 166 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 INO80CQ6PI98 192 aaPredicted RBP13.73□□□□□ -0.21
PACS1-201ENST00000320580 IFI27L1Q96BM0 104 aa13.73□□□□□ -0.21
PACS1-201ENST00000320580 H7C2G1 150 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 SPINK14Q6IE38 97 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 ZNF502Q8TBZ5 544 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 FOXC2Q99958 501 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 MAP1LC3AQ9H492 121 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 C5orf42Q9H799 3197 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 H0YJW9 148 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 MPV17P39210 176 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 PTGDSP41222 190 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 RHOGP84095 191 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 HCP5Q6MZN7 132 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 IFI27L2Q9H2X8 130 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 TRAV3A0A0B4J244 114 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 SMIM17P0DL12 118 aa13.72□□□□□ -0.21
PACS1-201ENST00000320580 MBNL2Q5VZF2 373 aaKnown RBP13.72□□□□□ -0.21
PACS1-201ENST00000320580 PSMB11A5LHX3 300 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 EPDR1Q9UM22 224 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 ERVK11-1P61568 191 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 NFAM1Q8NET5 270 aaPredicted RBP13.71□□□□□ -0.21
PACS1-201ENST00000320580 FAM168AQ92567 244 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 WNK2Q9Y3S1 2297 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 ROS1P08922 2347 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 LINC00473A8K010 186 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 ACP1P24666 158 aa13.71□□□□□ -0.21
PACS1-201ENST00000320580 HBDP02042 147 aa13.71□□□□□ -0.22
PACS1-201ENST00000320580 PRB4P10163 310 aaPredicted RBP13.71□□□□□ -0.22
PACS1-201ENST00000320580 RPL13AP40429 203 aaKnown RBP13.71□□□□□ -0.22
PACS1-201ENST00000320580 HOXA4Q00056 320 aaPredicted RBP13.71□□□□□ -0.22
PACS1-201ENST00000320580 FOXF2Q12947 444 aa13.71□□□□□ -0.22
PACS1-201ENST00000320580 TEX45Q8NA69 505 aa13.71□□□□□ -0.22
PACS1-201ENST00000320580 SMIM27A0A1W2PRY6 76 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 GFRA3O60609 400 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
PACS1-201ENST00000320580 KIR3DL3Q8N743 410 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 HIGD1AQ9Y241 93 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 WDR87Q6ZQQ6 2873 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 NPFFR1Q9GZQ6 430 aa13.7□□□□□ -0.22
PACS1-201ENST00000320580 OR11H12B2RN74 326 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 IGLV3-1P01715 115 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 DUTP33316 252 aaKnown RBP13.69□□□□□ -0.22
PACS1-201ENST00000320580 WDR82Q6UXN9 313 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 FADS6Q8N9I5 356 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 OR11H1Q8NG94 326 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 OR11H2Q8NH07 326 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 LHFPL4Q7Z7J7 247 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 C11orf52Q96A22 123 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 DOCK10Q96BY6 2186 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 VSTM5A8MXK1 200 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 MGST3O14880 152 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 FAM53AQ6NSI3 398 aaPredicted RBP13.69□□□□□ -0.22
PACS1-201ENST00000320580 LOXL2Q9Y4K0 774 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 KLRC4-KLRK1H3BQV0 150 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 CRYBA4P53673 196 aa13.69□□□□□ -0.22
PACS1-201ENST00000320580 TRBV6-6A0A0A6YYG2 114 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 GGTLC3B5MD39 225 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 CD40P25942 277 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 JPT1Q9UK76 154 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 NXPH1P58417 271 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 ZFAND6Q6FIF0 208 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 C16orf54Q6UWD8 224 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 KLK15Q9H2R5 256 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 CALYQ9NYX4 217 aa13.68□□□□□ -0.22
PACS1-201ENST00000320580 SS18L2Q9UHA2 77 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms