RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
CHAF1A-201ENST00000301280 TCAPO15273 167 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 GPR6P46095 362 aaPredicted RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 ZNF137PP52743 207 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 NUTF2P61970 127 aaKnown RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 FNDC4Q9H6D8 234 aaPredicted RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 CBLN4Q9NTU7 201 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 TGOLN2O43493 480 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 KRTDAPP60985 99 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 SLC25A48Q6ZT89 311 aaKnown RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 RAB9BQ9NP90 201 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 H0YJW9 148 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 PDE6DO43924 150 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 FAM222BQ8WU58 562 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 C1orf159Q96HA4 380 aa12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
CHAF1A-201ENST00000301280 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 ADMP35318 185 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 IGFL3Q6UXB1 125 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 DDB2Q92466 427 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 RAB1CQ92928 201 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 TMEM14BQ9NUH8 114 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 PPIAL4CA0A0B4J2A2 164 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 PPIAL4GP0DN37 164 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 LINC00574Q9H8X3 128 aa12.61□□□□□ -0.39
CHAF1A-201ENST00000301280 K7EN84 100 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 CNN1P51911 297 aaKnown RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 FAM19A2Q8N3H0 131 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 OR4C13Q8NGP0 309 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 TECRQ9NZ01 308 aaKnown RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 POLR3KQ9Y2Y1 108 aaPredicted RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 HRNRQ86YZ3 2850 aaPredicted RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 NAV2Q8IVL1 2488 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 G0S2P27469 103 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 VMA21Q3ZAQ7 101 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 C10orf113Q5VZT2 155 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 TOMM20LQ6UXN7 152 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 LINC00305Q7Z4B0 112 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 ADTRPQ96IZ2 230 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 TMSB15BA0A087X1C1 80 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 KIR2DS2P43631 304 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 RPL15P61313 204 aaKnown RBP12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 MMD2Q8IY49 270 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 BEND2Q8NDZ0 799 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 MS4A10Q96PG2 267 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 SLC45A2Q9UMX9 530 aa12.6□□□□□ -0.39
CHAF1A-201ENST00000301280 LOXP28300 417 aaPredicted RBP12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 GATA4P43694 442 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 TCTAP57738 103 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 GBGT1Q8N5D6 347 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 KCNIP2Q9NS61 270 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 TNFRSF19Q9NS68 423 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 PGPA6NDG6 321 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 GCGP01275 180 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 ZNF705AQ6ZN79 300 aaPredicted RBP12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 FAM168AQ92567 244 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 PAM16Q9Y3D7 125 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 IGHV3-49A0A0A0MS15 119 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 A0A1W2PPI3 338 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 GGTLC3B5MD39 225 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 PAXXQ9BUH6 204 aa12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 MRPL18Q9H0U6 180 aaKnown RBP12.59□□□□□ -0.39
CHAF1A-201ENST00000301280 CRISP2P16562 243 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 UBE2G1P62253 170 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 DNAJC4Q9NNZ3 241 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 WASHC3Q9Y3C0 194 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 PPOXP50336 477 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 TP53TG3Q9ULZ0 132 aa12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 FOXA2Q9Y261 457 aaPredicted RBP12.58□□□□□ -0.4
CHAF1A-201ENST00000301280 RPL27AP46776 148 aaKnown RBP12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 FOXA3P55318 350 aaPredicted RBP12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 LINC00310P59036 64 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 CD69Q07108 199 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 OR2D3Q8NGH3 330 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 ANAPC16Q96DE5 110 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 MPDU1O75352 247 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 RPL29P47914 159 aaKnown RBP12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 MFAP2P55001 183 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 IQCJQ1A5X6 159 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 TMEM144Q7Z5S9 345 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 C2CD3Q4AC94 2353 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 CORTO00230 105 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 TYMSP04818 313 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 TAS2R45P59539 299 aa12.57□□□□□ -0.4
CHAF1A-201ENST00000301280 LBHQ53QV2 105 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms