RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CD24P25063 80 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 IER3P46695 156 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 PLGLAQ15195 96 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 LINC00311Q8N616 119 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 TMEM18Q96B42 140 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 NDUFAF3Q9BU61 184 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 CA1P00915 261 aaPredicted RBP12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 MC5RP33032 325 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 TIGITQ495A1 244 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 FBXL15Q9H469 300 aa12.7□□□□□ -0.38
NCKIPSD-201ENST00000294129 PRB4P10163 310 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 RPL27AP46776 148 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 ZNF672Q499Z4 452 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 LEMD1Q68G75 181 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 PATE2Q6UY27 113 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 MMD2Q8IY49 270 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 PNKDQ8N490 385 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 RPEQ96AT9 228 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 FAM167A-AS1Q96KT0 104 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 NOL4LQ96MY1 436 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 C2orf88Q9BSF0 95 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 IL36BQ9NZH7 164 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 PDLIM4P50479 330 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 LINC00305Q7Z4B0 112 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR1L6Q8NGR2 347 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 PAXXQ9BUH6 204 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 IGKV1D-37A0A075B6S9 117 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 NUPR1O60356 82 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 MFAP2P55001 183 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 RAB4BP61018 213 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 RANP62826 216 aaKnown RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 ATG101Q9BSB4 218 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 CLEC7AQ9BXN2 247 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 COL25A1Q9BXS0 654 aaPredicted RBP12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
NCKIPSD-201ENST00000294129 IGHV1-3A0A0C4DH29 117 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 TCRBV4S1A1TA0A5B7 111 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 IGLC7A0M8Q6 106 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 SCGB1D1O95968 90 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 PRRX1P54821 245 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 GNG5P63218 68 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 MRGPRG-AS1Q2M3A8 158 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 SSX8Q7RTT4 187 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR4A5Q8NH83 315 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 HILPDAQ9Y5L2 63 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 C22orf46C9J442 243 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 C9JCJ5 164 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 FCN1O00602 326 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 EREGO14944 169 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 CA7P43166 264 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 ATP5IP56385 69 aaPredicted RBP12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 ARF6P62330 175 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 PRR27Q6MZM9 219 aa12.68□□□□□ -0.38
NCKIPSD-201ENST00000294129 BUB1B-PAK6H3BSN5 160 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 CD33P20138 364 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 ZNF841Q6ZN19 808 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 SSBP3Q9BWW4 388 aaPredicted RBP12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 V9GYV3 84 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 PSMB11A5LHX3 300 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 SNURFLB1AK76 121 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 LGALS7P47929 136 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 FAM71F2Q6NXP2 309 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 ZNF596Q8TC21 504 aa12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 MRPL18Q9H0U6 180 aaKnown RBP12.67□□□□□ -0.38
NCKIPSD-201ENST00000294129 ZNF137PP52743 207 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 BPIFB3P59826 476 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 KIAA1644Q3SXP7 199 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 MRPL54Q6P161 138 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 SIGLEC9Q9Y336 463 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 TOX4O94842 621 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 IGLV1-47P01700 117 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 GBGT1Q8N5D6 347 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 C19orf24Q9BVV8 132 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 MRPL32Q9BYC8 188 aaKnown RBP12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 CBLN4Q9NTU7 201 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 AMMECR1Q9Y4X0 333 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 KLRD1Q13241 179 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 IQCJQ1A5X6 159 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 LBHQ53QV2 105 aaPredicted RBP12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 PPP1R27Q86WC6 154 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 MSRB2Q9Y3D2 182 aa12.66□□□□□ -0.38
NCKIPSD-201ENST00000294129 MAP1AP78559 2803 aaPredicted RBP12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 TCAPO15273 167 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 CNIH1O95406 144 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 IBA57Q5T440 356 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 C8orf31Q8N9H6 132 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 ST6GALNAC3Q8NDV1 305 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR1L4Q8NGR5 311 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 BTF3L4Q96K17 158 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 FAM103A1Q9BTL3 118 aaKnown RBP12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR8B3Q8NGG8 313 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 OR8B2Q96RD0 313 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 S4R3C0 116 aa12.65□□□□□ -0.38
NCKIPSD-201ENST00000294129 F2Z2F3 143 aa12.64□□□□□ -0.39
NCKIPSD-201ENST00000294129 FOSL1P15407 271 aa12.64□□□□□ -0.39
NCKIPSD-201ENST00000294129 ZNF124Q15973 351 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms