RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GPR132Q9UNW8 380 aa7.15□□□□□ -1.26
VPS41-201ENST00000265745 TRAV2A0A0B4J234 112 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 DISC1C4P0D8 188 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 DNASE2O00115 360 aaPredicted RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 CTDSPLO15194 276 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 NPPCP23582 126 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 OPRK1P41145 380 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 DHODHQ02127 395 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 PMS2P11Q13670 270 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 CEMP1Q6PRD7 247 aaPredicted RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 OR4C16Q8NGL9 310 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 RNASE11Q8TAA1 199 aaKnown RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 DYNC2LI1Q8TCX1 351 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 RBPMSQ93062 196 aaKnown RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 GPR146Q96CH1 333 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 DIRAS2Q96HU8 199 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 RABL2AQ9UBK7 228 aaPredicted RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 RABL2BQ9UNT1 228 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 C14orf166Q9Y224 244 aaKnown RBP7.14□□□□□ -1.27
VPS41-201ENST00000265745 TMEM56-RWDD3S4R434 201 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 HYDINQ4G0P3 5121 aa7.14□□□□□ -1.27
VPS41-201ENST00000265745 A0A1W2PS18 150 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 NUPR2A6NF83 97 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 CRYM-AS1A6NIL9 109 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 AKAIN1P0CW23 69 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 CRYBB3P26998 211 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 HTR2BP41595 481 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 TMBIM6P55061 237 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 C2orf83Q53S99 150 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 TMEM268Q5VZI3 342 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 CLVS1Q8IUQ0 354 aaPredicted RBP7.13□□□□□ -1.27
VPS41-201ENST00000265745 TMEM217Q8N7C4 229 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 OR51S1Q8NGJ8 323 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 RAB2BQ8WUD1 216 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 GATAD1Q8WUU5 269 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 LINC00476Q8WZB0 136 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 METTL26Q96S19 204 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 PRRT1Q99946 306 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 RARRES2Q99969 163 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 SOSTQ9BQB4 213 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 TMEM231Q9H6L2 316 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 HEYLQ9NQ87 328 aaPredicted RBP7.13□□□□□ -1.27
VPS41-201ENST00000265745 CCDC59Q9P031 241 aaKnown RBP7.13□□□□□ -1.27
VPS41-201ENST00000265745 CACNG5Q9UF02 275 aa7.13□□□□□ -1.27
VPS41-201ENST00000265745 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
VPS41-201ENST00000265745 TRAV30A0A087WSZ9 112 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 RPS10-NUDT3A0A1W2PQS6 291 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 ANKRD20A5PA0PJZ0 165 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 GSTZ1O43708 216 aaPredicted RBP7.12□□□□□ -1.27
VPS41-201ENST00000265745 SCGB2A1O75556 95 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 IGLC1P0CG04 106 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 DEFB131AP59861 70 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 IL18Q14116 193 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 TIGITQ495A1 244 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 NMSQ5H8A3 153 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 LEMD1Q68G75 181 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 PRSS54Q6PEW0 395 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 FAM24BQ8N5W8 94 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 OR11H2Q8NH07 326 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 RNASEH2CQ8TDP1 164 aaKnown RBP7.12□□□□□ -1.27
VPS41-201ENST00000265745 TMEM170AQ8WVE7 144 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 TMEM230Q96A57 120 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 BCL7BQ9BQE9 202 aa7.12□□□□□ -1.27
VPS41-201ENST00000265745 CEBPZOSA8MTT3 80 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 K7EQG2 157 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 LY6G6CO95867 125 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 SLC25A4P12235 298 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 TNFSF8P32971 234 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 P2RY1P47900 373 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 YPEL3P61236 119 aaPredicted RBP7.11□□□□□ -1.27
VPS41-201ENST00000265745 TMEM187Q14656 261 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 SLC24A4Q8NFF2 622 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 Q8WTZ3 238 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 PHLDA1Q8WV24 401 aaPredicted RBP7.11□□□□□ -1.27
VPS41-201ENST00000265745 IL22RA2Q969J5 263 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 SLIRPQ9GZT3 109 aaKnown RBP7.11□□□□□ -1.27
VPS41-201ENST00000265745 CACFD1Q9UGQ2 172 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 RSL24D1Q9UHA3 163 aaKnown RBP7.11□□□□□ -1.27
VPS41-201ENST00000265745 RABAC1Q9UI14 185 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 KCNIP3Q9Y2W7 256 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 KLK5Q9Y337 293 aaPredicted RBP7.11□□□□□ -1.27
VPS41-201ENST00000265745 BIRC6Q9NR09 4857 aa7.11□□□□□ -1.27
VPS41-201ENST00000265745 FABP12A6NFH5 140 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 NXPH3O95157 252 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 CA1P00915 261 aaPredicted RBP7.1□□□□□ -1.27
VPS41-201ENST00000265745 GIG44P09565 113 aaPredicted RBP7.1□□□□□ -1.27
VPS41-201ENST00000265745 SULT1A3P0DMM9 295 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 SULT1A4P0DMN0 295 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 OR10J1P30954 320 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 RND2P52198 227 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 RBMS2Q15434 407 aaKnown RBP7.1□□□□□ -1.27
VPS41-201ENST00000265745 STXBP6Q8NFX7 210 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 OR1S2Q8NGQ3 325 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 DCANP1Q8TF63 244 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 RAB24Q969Q5 203 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 GRAMD2BQ96HH9 432 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 NARS2Q96I59 477 aaKnown RBP7.1□□□□□ -1.27
VPS41-201ENST00000265745 SCGB3A2Q96PL1 93 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 SCP2D1Q9UJQ7 156 aa7.1□□□□□ -1.27
VPS41-201ENST00000265745 A0A0B4J2A0 478 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms