RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CRYBB3P26998 211 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 SRPXP78539 464 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 TMEM128Q5BJH2 165 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 TMEM231Q9H6L2 316 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 MAP6D1Q9H9H5 199 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 U3KQ87 197 aa11.88□□□□□ -0.51
USE1-201ENST00000263897 PIGBOS1A0A0B4J2F0 54 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
USE1-201ENST00000263897 IGLC1P0CG04 106 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 NPY1RP25929 384 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 RND2P52198 227 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 YPEL3P61236 119 aaPredicted RBP11.87□□□□□ -0.51
USE1-201ENST00000263897 ZNF124Q15973 351 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 ETFRF1Q6IPR1 90 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 TMED4Q7Z7H5 227 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 RNF183Q96D59 192 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 METTL26Q96S19 204 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
USE1-201ENST00000263897 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 RBKSQ9H477 322 aa11.87□□□□□ -0.51
USE1-201ENST00000263897 TRAV2A0A0B4J234 112 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 IFNA10P01566 189 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 RPL11P62913 178 aaKnown RBP11.86□□□□□ -0.51
USE1-201ENST00000263897 DEFB135Q30KP9 77 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 OR1S2Q8NGQ3 325 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 DTD1Q8TEA8 209 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 Q8WTZ3 238 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 NPIPB3Q92617 1050 aa11.86□□□□□ -0.51
USE1-201ENST00000263897 DUXBA0A1W2PPF3 345 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 OR10J1P30954 320 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 ATP5IP56385 69 aaPredicted RBP11.85□□□□□ -0.51
USE1-201ENST00000263897 RBMS2Q15434 407 aaKnown RBP11.85□□□□□ -0.51
USE1-201ENST00000263897 SPANXN2Q5MJ10 180 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 LRTM2Q8N967 370 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 OR1S1Q8NH92 325 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 CSTL1Q9H114 145 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 U3KQE9 123 aa11.85□□□□□ -0.51
USE1-201ENST00000263897 PITX3O75364 302 aa11.84□□□□□ -0.51
USE1-201ENST00000263897 VAMP1P23763 118 aa11.84□□□□□ -0.51
USE1-201ENST00000263897 P2RY1P47900 373 aa11.84□□□□□ -0.51
USE1-201ENST00000263897 NARS2Q96I59 477 aaKnown RBP11.84□□□□□ -0.51
USE1-201ENST00000263897 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
USE1-201ENST00000263897 RABAC1Q9UI14 185 aa11.84□□□□□ -0.51
USE1-201ENST00000263897 DYNC2H1Q8NCM8 4307 aaKnown RBP11.84□□□□□ -0.51
USE1-201ENST00000263897 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 SLC25A6P12236 298 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 DEFB131AP59861 70 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 LYG2Q86SG7 212 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 ACY3Q96HD9 319 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 GRAMD2BQ96HH9 432 aa11.83□□□□□ -0.52
USE1-201ENST00000263897 A0A0J9YWU9 116 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 K7EQG2 157 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 SFT2D2O95562 160 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 IFNA4P05014 189 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
USE1-201ENST00000263897 RD3LP0DJH9 198 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 GPX4P36969 197 aaPredicted RBP11.82□□□□□ -0.52
USE1-201ENST00000263897 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 CENPSQ8N2Z9 138 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 FAM24BQ8N5W8 94 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 AGRNO00468 2067 aa11.82□□□□□ -0.52
USE1-201ENST00000263897 TOMM40O96008 361 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 IL4P05112 153 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
USE1-201ENST00000263897 BAK1Q16611 211 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 C16orf54Q6UWD8 224 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 TMED3Q9Y3Q3 217 aa11.81□□□□□ -0.52
USE1-201ENST00000263897 HELTA6NFD8 242 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 PSG1P11464 419 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 ATF4P18848 351 aaPredicted RBP11.8□□□□□ -0.52
USE1-201ENST00000263897 EIF2B2P49770 351 aaKnown RBP11.8□□□□□ -0.52
USE1-201ENST00000263897 AP2S1P53680 142 aaPredicted RBP11.8□□□□□ -0.52
USE1-201ENST00000263897 EWSR1Q01844 656 aaKnown RBP eCLIP11.8□□□□□ -0.52
USE1-201ENST00000263897 GAMTQ14353 236 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 GLMPQ8WWB7 406 aa11.8□□□□□ -0.52
USE1-201ENST00000263897 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
USE1-201ENST00000263897 NAP1L6A6NFF2 107 aa11.79□□□□□ -0.52
USE1-201ENST00000263897 MED6O75586 246 aa11.79□□□□□ -0.52
USE1-201ENST00000263897 INPP1P49441 399 aa11.79□□□□□ -0.52
USE1-201ENST00000263897 UBE2MP61081 183 aaKnown RBP11.79□□□□□ -0.52
USE1-201ENST00000263897 RARRES2Q99969 163 aa11.79□□□□□ -0.52
USE1-201ENST00000263897 BUB3O43684 328 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 NDUFB6O95139 128 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 HOXB5P09067 269 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 IAPPP10997 89 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 RAB11AP62491 216 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 DHRS2Q13268 280 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 TRIQKQ629K1 86 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 OR51G1Q8NGK1 321 aa11.78□□□□□ -0.52
USE1-201ENST00000263897 SDHCQ99643 169 aaPredicted RBP11.78□□□□□ -0.52
USE1-201ENST00000263897 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 C9orf170A2RU37 121 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 ZFP92A6NM28 416 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 SYNGR2O43760 224 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms