RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 ZNF788Q6ZQV5 615 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 H1FXQ92522 213 aaKnown RBP13.35□□□□□ -0.27
ZNF541-201ENST00000263351 COMMD5Q9GZQ3 224 aa13.35□□□□□ -0.27
ZNF541-201ENST00000263351 NDUFB8O95169 186 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 Q56UQ5 140 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 Q6ZN92 141 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 LINC00173Q6ZV60 143 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 SLC35E1Q96K37 410 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 MALRD1Q5VYJ5 2156 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 CNTFRP26992 372 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 RTL8BQ17RB0 113 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 C2orf83Q53S99 150 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 ZNF329Q86UD4 541 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 ASCL3Q9NQ33 180 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 TUBG2Q9NRH3 451 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 LY96Q9Y6Y9 160 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 CACNA1BQ00975 2339 aa13.34□□□□□ -0.27
ZNF541-201ENST00000263351 H0YJW9 148 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 COX7A2P2O60397 106 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.27
ZNF541-201ENST00000263351 RNASEKQ6P5S7 137 aaKnown RBP13.33□□□□□ -0.27
ZNF541-201ENST00000263351 C11orf42Q8N5U0 333 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 FAM222BQ8WU58 562 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 TXN2Q99757 166 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 SAP30LQ9HAJ7 183 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 DNAJC4Q9NNZ3 241 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 NDUFA4L2Q9NRX3 87 aa13.33□□□□□ -0.27
ZNF541-201ENST00000263351 IGLV3-9A0A075B6K5 115 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 SLC25A17O43808 307 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 IGLC2P0DOY2 106 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 IGLC3P0DOY3 106 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 POU2AF1Q16633 256 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 RNF2Q99496 336 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 PAXXQ9BUH6 204 aa13.33□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF430Q9H8G1 570 aaPredicted RBP13.33□□□□□ -0.28
ZNF541-201ENST00000263351 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 HIGD1CA8MV81 97 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 C22orf46C9J442 243 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 OR2D3Q8NGH3 330 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 TCF21O43680 179 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF137PP52743 207 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 MZT1Q08AG7 82 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 LINC00305Q7Z4B0 112 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 URB1-AS1Q96HZ7 61 aa13.32□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF331Q9NQX6 463 aaPredicted RBP13.32□□□□□ -0.28
ZNF541-201ENST00000263351 A0A1W2PRE2 83 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 IZUMO1RA6ND01 250 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 FTH1P19P0C7X4 201 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF138P52744 262 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 TIMM23BQ5SRD1 257 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 C10orf113Q5VZT2 155 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 TMEM200BQ69YZ2 307 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 UNQ5815/PRO19632Q6UWF5 114 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 OR1B1Q8NGR6 318 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 CCL17Q92583 94 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 FXYD5Q96DB9 178 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 MBD6Q96DN6 1003 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 CHODLQ9H9P2 273 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF257Q9Y2Q1 563 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 PTPRZ1P23471 2315 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 MBD3L4A6NDZ8 208 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 MBD3L3A6NE82 208 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 MBD3L5A6NJ08 208 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 PEX7O00628 323 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 FSTL3O95633 263 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 TAS2R45P59539 299 aa13.31□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 MBD3L2Q8NHZ7 208 aaPredicted RBP13.31□□□□□ -0.28
ZNF541-201ENST00000263351 OR10J3Q5JRS4 329 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 WDR73Q6P4I2 378 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 WFDC8Q8IUA0 241 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 CORO2AQ92828 525 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 TLN1Q9Y490 2541 aaKnown RBP13.3□□□□□ -0.28
ZNF541-201ENST00000263351 A0A1W2PPI3 338 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 DLL1O00548 723 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 ENSAO43768 121 aaKnown RBP13.3□□□□□ -0.28
ZNF541-201ENST00000263351 FAM87AP0C7U9 286 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 PRRX1P54821 245 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 IGFL2Q6UWQ7 119 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 OR4B1Q8NGF8 309 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 OR1L8Q8NGR8 309 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 BET1LQ9NYM9 111 aa13.3□□□□□ -0.28
ZNF541-201ENST00000263351 TRBV9A0A0B4J1U6 114 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 SIAH2O43255 324 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 HLA-DQA1P01909 254 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 BTF3P20290 206 aaKnown RBP13.29□□□□□ -0.28
ZNF541-201ENST00000263351 CD40P25942 277 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 ZNF833PQ6ZTB9 187 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 FLYWCH2Q96CP2 140 aaKnown RBP13.29□□□□□ -0.28
ZNF541-201ENST00000263351 ADTRPQ96IZ2 230 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 SPTA1P02549 2419 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 OR10X1Q8NGY0 326 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 OR5B3Q8NH48 314 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
ZNF541-201ENST00000263351 PGPA6NDG6 321 aa13.28□□□□□ -0.28
ZNF541-201ENST00000263351 H0Y8G0 127 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms