RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 CD24P25063 80 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 TDGF1P3P51864 188 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 CX3CL1P78423 397 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 MUC21Q5SSG8 566 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ETFRF1Q6IPR1 90 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 C19orf35Q6ZS72 473 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 GOLT1AQ6ZVE7 132 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 OR4C5Q8NGB2 326 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 PRSS3P2Q8NHM4 247 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 OSR1Q8TAX0 266 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 RCHY1Q96PM5 261 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 GNB1LQ9BYB4 327 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 TMEM14BQ9NUH8 114 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ANKHD1Q8IWZ3 2542 aaKnown RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 NCKAP5O14513 1909 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 LOC102724200A0A096LPH7 203 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 IGHV3-35A0A0C4DH35 117 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 A0A1W2PRE2 83 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 CBY3A6NI87 242 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 NCBP2LA6PVI3 153 aaKnown RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 LYNX1G3V0Z9 82 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 K7EQM0 130 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 LCE2BO14633 110 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 WNT2P09544 360 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 C3orf79P0CE67 100 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 LYNX1P0DP58 116 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 YPEL3P61236 119 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 SELENOTP62341 195 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 FA2HQ7L5A8 372 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 LOXL4Q96JB6 756 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 DIRC2Q96SL1 478 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 ASCL2Q99929 193 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 RASL11BQ9BPW5 248 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 TMEM208Q9BTX3 173 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 MCRIP2Q9BUT9 160 aaKnown RBP3.87□□□□□ -1.79
USP44-201ENST00000258499 HILPDAQ9Y5L2 63 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 V9GYV3 84 aa3.87□□□□□ -1.79
USP44-201ENST00000258499 TRAV8-1A0A0A6YYK1 113 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 LOC389332A0A1B0GUA5 103 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 IZUMO1RA6ND01 250 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 FAM90A27PA6NNH2 459 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SNAI2O43623 268 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 LEPROTL1O95214 131 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 RNASE2P10153 161 aaKnown RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 BSPH1Q075Z2 132 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 DIAPH2-AS1Q14236 149 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 NUDT10Q8NFP7 164 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 STXBP6Q8NFX7 210 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 FAM168AQ92567 244 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 NUDT11Q96G61 164 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 GAFA1Q96PS6 74 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 C19orf24Q9BVV8 132 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 MRPL32Q9BYC8 188 aaKnown RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 RNF24Q9Y225 148 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 LSM4Q9Y4Z0 139 aaKnown RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 LINC00312Q9Y6C7 94 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 TRAV9-1A0A075B6T8 112 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 BMPR1BO00238 502 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 NPSP0C0P6 89 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 FAM87AP0C7U9 286 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PPOXP50336 477 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PDLIM4P50479 330 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 MORN5Q5VZ52 161 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 C1orf229Q6ZS94 237 aaPredicted RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 OR4F17Q8NGA8 305 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 CACNG8Q8WXS5 425 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 FBXL15Q9H469 300 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 HIGD1AQ9Y241 93 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 LAMTOR2Q9Y2Q5 125 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 NOTCH3Q9UM47 2321 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 COL5A1P20908 1838 aaPredicted RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 IGKV1OR2-108A0A075B7D4 117 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 IGHV3OR16-8A0A075B7F1 116 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 A0A1W2PS18 150 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SH2D7A6NKC9 451 aaPredicted RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 C17orf100A8MU93 164 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 CORTO00230 105 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SSBP2P81877 361 aaPredicted RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 PRR20EP86478 221 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PRR20CP86479 221 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PRR20DP86480 221 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PRR20BP86481 221 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PRR20AP86496 221 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SLAQ13239 276 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 NUP35Q8NFH5 326 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 OR8A1Q8NGG7 326 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SRSF12Q8WXF0 261 aaKnown RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 NEUROG1Q92886 237 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 HCFC1P51610 2035 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 DLEU1O43261 78 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 IGLV1-44P01699 117 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 CSN1S1P47710 185 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 ZNF138P52744 262 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 PRRX1P54821 245 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 HBBP68871 147 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 C2orf83Q53S99 150 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms