RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZNF319Q9P2F9 582 aa10.91□□□□□ -0.66
PRPF38A-201ENST00000257181 LGALS1P09382 135 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 HOXB4P17483 251 aaPredicted RBP10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 TMSB15BA0A087X1C1 80 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 IQCJQ1A5X6 159 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 RUSC1-AS1Q66K80 236 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 PSCAO43653 123 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 ZNF207O43670 478 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 RAMP3O60896 148 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 RHPN1-AS1Q9BWJ2 59 aa10.9□□□□□ -0.66
PRPF38A-201ENST00000257181 ZNF253O75346 499 aa10.9□□□□□ -0.67
PRPF38A-201ENST00000257181 ST6GALNAC6Q969X2 333 aa10.9□□□□□ -0.67
PRPF38A-201ENST00000257181 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.67
PRPF38A-201ENST00000257181 DOCK8Q8NF50 2099 aa10.9□□□□□ -0.67
PRPF38A-201ENST00000257181 CD7P09564 240 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 RTBDNQ9BSG5 229 aaPredicted RBP10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 SPNP16150 400 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 TMEM256Q8N2U0 113 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 TRAV34A0A0B4J273 112 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 MALP21145 153 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 SEC11AP67812 179 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 SRSF2Q01130 221 aaKnown RBP10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 SRD5A3Q9H8P0 318 aa10.89□□□□□ -0.67
PRPF38A-201ENST00000257181 CXorf65A6NEN9 183 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 LDLRAD4O15165 306 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 C11orf42Q8N5U0 333 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 ATP5LO75964 103 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 SCGB1D4Q6XE38 83 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 FER1L6-AS1Q8NA97 138 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 DANCRP0C864 163 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 COTL1Q14019 142 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 DEFB112Q30KQ8 113 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 OR4C5Q8NGB2 326 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 C9JCJ5 164 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 C11orf44Q8N8P7 122 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 RCHY1Q96PM5 261 aa10.88□□□□□ -0.67
PRPF38A-201ENST00000257181 IGHV4-30-2A0A087WSY4 118 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 A8MXK9 166 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 NDUFB4O95168 129 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 HBBP68871 147 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 NDUFA11Q86Y39 141 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 WDR83OSQ9Y284 106 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 CACNA1IQ9P0X4 2223 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 IGKV1-27A0A075B6S5 117 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 K7EM74 188 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 M0R143 59 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 PPIFP30405 207 aaKnown RBP10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 ZNF138P52744 262 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 DAD1P61803 113 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 CD81P60033 236 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 ID3Q02535 119 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 TTC9CQ8N5M4 171 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 Q8NFD4 153 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 CNTRLQ7Z7A1 2325 aa10.87□□□□□ -0.67
PRPF38A-201ENST00000257181 ATP6V0E1O15342 81 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 APOMO95445 188 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 STAG3L2P0CL84 134 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 RPP21Q9H633 154 aaKnown RBP10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 COX6CP09669 75 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 SCGB1C2P0DMR2 95 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 KRTDAPP60985 99 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 IGHV4-61A0A0C4DH41 118 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 LGALS3P17931 250 aaKnown RBP10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 Q6ZR03 302 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 SMIM12Q96EX1 92 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 H3BQ15 152 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 ZNF324O75467 553 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 FHITP49789 147 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 EMP1P54849 157 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 CRYBB3P26998 211 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 NUDT10Q8NFP7 164 aa10.86□□□□□ -0.67
PRPF38A-201ENST00000257181 SEC16AO15027 2179 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 C2orf16Q68DN1 1984 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 A0A087WX48 190 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 TMEM183BQ1AE95 376 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 AHCTF1Q8WYP5 2266 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 M0R3E3 92 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 ZNF880Q6PDB4 577 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 REC114Q7Z4M0 266 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 OR11H1Q8NG94 326 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 OR10W1Q8NGF6 305 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 VAMP8Q9BV40 100 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 OR11H7Q8NGC8 314 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 PRELID3AQ96N28 172 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 DPH3P1Q9H4G8 78 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 EPDR1Q9UM22 224 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 TRBV20OR9-2A0A075B6H5 130 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 IGHV3-66A0A0C4DH42 116 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 A0A1W2PNU3 283 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 CCL24O00175 119 aa10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 MRPL54Q6P161 138 aaKnown RBP10.85□□□□□ -0.67
PRPF38A-201ENST00000257181 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms