RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ZNF114Q8NC26 417 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 Q96MF0 132 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 ZANQ9Y493 2812 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 TGFAP01135 160 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 GATA2P23769 480 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-201ENST00000254816 GPX4P36969 197 aaPredicted RBP14.97□□□□□ -0.01
TRIM47-201ENST00000254816 TMEM241Q24JQ0 296 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 CYP2G1PQ6ZSU1 146 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 SLC35E1Q96K37 410 aa14.97□□□□□ -0.01
TRIM47-201ENST00000254816 F11RQ9Y624 299 aaKnown RBP14.97□□□□□ -0.01
TRIM47-201ENST00000254816 TRGC2P03986 189 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 LOXL1Q08397 574 aaPredicted RBP14.96□□□□□ -0.01
TRIM47-201ENST00000254816 KRTAP1-3Q8IUG1 177 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 STPG3Q8N7X2 389 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 CACNG8Q8WXS5 425 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 FAM210BQ96KR6 192 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 TMEM250H0YL14 139 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 OR10J1P30954 320 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 B2MP61769 119 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 TMEM219Q86XT9 240 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 NECAP1Q8NC96 275 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 OR1P1Q8NH06 330 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 NANPQ8TBE9 248 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 SLC25A33Q9BSK2 321 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 WNT10AQ9GZT5 417 aa14.96□□□□□ -0.01
TRIM47-201ENST00000254816 ZNF469Q96JG9 3925 aaPredicted RBP14.95□□□□□ -0.02
TRIM47-201ENST00000254816 A0A1W2PPV4 95 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 SH2D7A6NKC9 451 aaPredicted RBP14.95□□□□□ -0.02
TRIM47-201ENST00000254816 SEC14L6B5MCN3 397 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 C11orf94C9JXX5 98 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 CLN5O75503 358 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 RND2P52198 227 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 NDUFA6P56556 154 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 RPL23P62829 140 aaKnown RBP14.95□□□□□ -0.02
TRIM47-201ENST00000254816 RAB31Q13636 194 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 ZNF562Q6V9R5 426 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 C16orf82Q7Z2V1 217 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 NPIPB3Q92617 1050 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 ARPC1AQ92747 370 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 PVRIGQ6DKI7 326 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 TMEM242Q9NWH2 141 aa14.95□□□□□ -0.02
TRIM47-201ENST00000254816 GCN1Q92616 2671 aaKnown RBP14.95□□□□□ -0.02
TRIM47-201ENST00000254816 S100A8P05109 93 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 IGHV4-31P0DP07 118 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 NPPCP23582 126 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 ATP5G3P48201 142 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 ASPHD1Q5U4P2 390 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 PIFOQ8TCI5 191 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 HSPB9Q9BQS6 159 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 C1RLQ9NZP8 487 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 SLC45A2Q9UMX9 530 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 IGHV7-81A0A0B4J1V7 117 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 LINC00869P0C866 280 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 GATA3P23771 443 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 RPL29P47914 159 aaKnown RBP14.94□□□□□ -0.02
TRIM47-201ENST00000254816 CST9LP1Q5W188 147 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 OR5T1Q8NG75 326 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 RASL11BQ9BPW5 248 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 DOK5Q9P104 306 aa14.94□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BKO60814 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 MT-CO2P00403 227 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BJP06899 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 ARL14EPLP0DKL9 152 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BOP23527 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BBP33778 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BDP58876 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BCP62807 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRR20EP86478 221 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRR20CP86479 221 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRR20DP86480 221 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRR20BP86481 221 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRR20AP86496 221 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST2H2BEQ16778 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.93□□□□□ -0.02
TRIM47-201ENST00000254816 SPNS3Q6ZMD2 512 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BHQ93079 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 MBD6Q96DN6 1003 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BNQ99877 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 HIST1H2BMQ99879 126 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 MEGF9Q9H1U4 602 aa14.93□□□□□ -0.02
TRIM47-201ENST00000254816 PRRC2AP48634 2157 aaKnown RBP14.93□□□□□ -0.02
TRIM47-201ENST00000254816 S100A9P06702 114 aaKnown RBP14.92□□□□□ -0.02
TRIM47-201ENST00000254816 TMEM249Q2WGJ8 235 aa14.92□□□□□ -0.02
TRIM47-201ENST00000254816 SRSF8Q9BRL6 282 aaKnown RBP14.92□□□□□ -0.02
TRIM47-201ENST00000254816 SMIM6P0DI80 62 aa14.92□□□□□ -0.02
TRIM47-201ENST00000254816 CTDSP1Q9GZU7 261 aa14.92□□□□□ -0.02
TRIM47-201ENST00000254816 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
TRIM47-201ENST00000254816 IGKV1D-37A0A075B6S9 117 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 ZNF90Q03938 601 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 LY6EQ16553 131 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 DERL1Q9BUN8 251 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 ELOVL1Q9BW60 279 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 KCNIP2Q9NS61 270 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 AURKAIP1Q9NWT8 199 aaPredicted RBP14.91□□□□□ -0.02
TRIM47-201ENST00000254816 MDFIC2A0A1B0GVS7 189 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 IFITM10A6NMD0 228 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 CRYGCP07315 174 aa14.91□□□□□ -0.02
TRIM47-201ENST00000254816 EGR2P11161 476 aaPredicted RBP14.91□□□□□ -0.02
TRIM47-201ENST00000254816 SPATA31B1PQ5VZV4 182 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms