RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ASCL2Q99929 193 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 IL19Q9UHD0 177 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 RNF114Q9Y508 228 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 TRGV10A0A0A0MS01 117 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 UPK2O00526 184 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 ORM2P19652 201 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 IBA57Q5T440 356 aaKnown RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 V9GYV3 84 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 J3QR06 171 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 IGLV2-8P01709 118 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 RHOBP62745 196 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 PAFAH1B2P68402 229 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 MUC21Q5SSG8 566 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 C1orf185Q5T7R7 199 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 TEX36Q5VZQ5 186 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 KLHDC1Q8N7A1 406 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 ZNF738Q8NE65 137 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 PPP1R35Q8TAP8 253 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 C22orf15Q8WYQ4 148 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 EAF1Q96JC9 268 aaPredicted RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 MRPL20Q9BYC9 149 aaKnown RBP8.2□□□□□ -1.1
COPB1-201ENST00000249923 UQCR10Q9UDW1 63 aa8.2□□□□□ -1.1
COPB1-201ENST00000249923 A0A1W2PN81 502 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 ENSAO43768 121 aaKnown RBP8.19□□□□□ -1.1
COPB1-201ENST00000249923 RNASE2P10153 161 aaKnown RBP8.19□□□□□ -1.1
COPB1-201ENST00000249923 ZNF138P52744 262 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 UBE2L3P68036 154 aaKnown RBP8.19□□□□□ -1.1
COPB1-201ENST00000249923 MRGPRG-AS1Q2M3A8 158 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 IGF2-ASQ6U949 168 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 CORO2AQ92828 525 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 RITA1Q96K30 269 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 NABP2Q9BQ15 211 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 ALKBH7Q9BT30 221 aaPredicted RBP8.19□□□□□ -1.1
COPB1-201ENST00000249923 MRPL36Q9P0J6 103 aaKnown RBP8.19□□□□□ -1.1
COPB1-201ENST00000249923 ZNF835Q9Y2P0 537 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 NUDT3O95989 172 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 C3orf79P0CE67 100 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 TMEM11P17152 192 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 C3orf36Q3SXR2 165 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 C10orf55Q5SWW7 151 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 ZNF833PQ6ZTB9 187 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 ZADH2Q8N4Q0 377 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 COL6A6A6NMZ7 2263 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 TRAV5A0A0B4J249 113 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 BMPR1BO00238 502 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 LGALS4P56470 323 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 UBE2G1P62253 170 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 KIR3DL3Q8N743 410 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 OR4B1Q8NGF8 309 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 RNF2Q99496 336 aa8.19□□□□□ -1.1
COPB1-201ENST00000249923 THBDP07204 575 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 ADIPOQQ15848 244 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 TM4SF20Q53R12 229 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 TMEM116Q8NCL8 245 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 DAZAP1Q96EP5 407 aaKnown RBP8.18□□□□□ -1.1
COPB1-201ENST00000249923 FAM167A-AS1Q96KT0 104 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 ZNF257Q9Y2Q1 563 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 TLN1Q9Y490 2541 aaKnown RBP8.18□□□□□ -1.1
COPB1-201ENST00000249923 FSTL3O95633 263 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 AREGP15514 252 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 DLX1P56177 255 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 RIPPLY3P57055 190 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 FNDC4Q9H6D8 234 aaPredicted RBP8.18□□□□□ -1.1
COPB1-201ENST00000249923 TPSG1Q9NRR2 321 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
COPB1-201ENST00000249923 C9JCJ5 164 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 H0YJW9 148 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 REG1AP05451 166 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 PPOXP50336 477 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 SELENOTP62341 195 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 WT1-ASQ06250 92 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 LYPD2Q6UXB3 125 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 FLYWCH2Q96CP2 140 aaKnown RBP8.17□□□□□ -1.1
COPB1-201ENST00000249923 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 NDUFA4L2Q9NRX3 87 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 CELSR1Q9NYQ6 3014 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 TMSB15BA0A087X1C1 80 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 A0A0G2JNJ9 132 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 CCL25O15444 150 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 TPTE2P1Q5T6R2 138 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 IGF2BP2-AS1Q96M15 143 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 SLC25A2Q9BXI2 301 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 Q9UFV3 132 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 IGKV1D-37A0A075B6S9 117 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 SERTM2A0A1B0GWG4 89 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 HYPMO75409 117 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 IGLV2-23P01705 113 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 FXYD7P58549 80 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 GNG5P63218 68 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 C2orf83Q53S99 150 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 MPV17L2Q567V2 206 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 TMEM200BQ69YZ2 307 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 CTSZQ9UBR2 303 aa8.17□□□□□ -1.1
COPB1-201ENST00000249923 PRNDQ9UKY0 176 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms