RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 TMEM170AQ8WVE7 144 aa9.07□□□□□ -0.96
RFPL3-201ENST00000249007 SEC22AQ96IW7 307 aa9.07□□□□□ -0.96
RFPL3-201ENST00000249007 TTTY10Q9BZA0 68 aa9.07□□□□□ -0.96
RFPL3-201ENST00000249007 MOB1AQ9H8S9 216 aa9.07□□□□□ -0.96
RFPL3-201ENST00000249007 NAGKQ9UJ70 344 aa9.07□□□□□ -0.96
RFPL3-201ENST00000249007 TRBV5-7A0A0A0MS05 114 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 NPIPB11E5RHQ5 1161 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 SLC33A1O00400 549 aaPredicted RBP9.06□□□□□ -0.96
RFPL3-201ENST00000249007 SOX15O60248 233 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 CA11O75493 328 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 HBE1P02100 147 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 RAB6AP20340 208 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 CAMLGP49069 296 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 PAFAH1B2P68402 229 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 ECSCRQ19T08 205 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 ODF4Q2M2E3 257 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 Q6ZSR3 168 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 BBS1Q8NFJ9 593 aa9.06□□□□□ -0.96
RFPL3-201ENST00000249007 FOXA2Q9Y261 457 aaPredicted RBP9.06□□□□□ -0.96
RFPL3-201ENST00000249007 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 IGHV7-81A0A0B4J1V7 117 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 H0YIZ8 118 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 SRSF10O75494 262 aaKnown RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 HLA-DRB1P01911 266 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 BLVRBP30043 206 aaPredicted RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 GNRHRP30968 328 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 SSTR5P35346 364 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 P2RY1P47900 373 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 RPL29P47914 159 aaKnown RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 HLA-DRB3P79483 266 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 EWSR1Q01844 656 aaKnown RBP eCLIP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 PPP1R1AQ13522 171 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 PRSS8Q16651 343 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 ZNF506Q5JVG8 444 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 RPL7L1Q6DKI1 246 aaKnown RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 LINC00336Q6ZUF6 198 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 DEFB125Q8N687 156 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 OR51T1Q8NGJ9 327 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 OR9G4Q8NGQ1 327 aa9.05□□□□□ -0.96
RFPL3-201ENST00000249007 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
RFPL3-201ENST00000249007 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 RBFOX3A6NFN3 312 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 SLC17A2O00624 439 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 HSPB6O14558 160 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 TYMSP04818 313 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 SRP19P09132 144 aaKnown RBP9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PTHLHP12272 177 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 CCL1P22362 96 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 IL3RAP26951 378 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 MTCP1P56278 107 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 RAB11AP62491 216 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 RHOGP84095 191 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PRR20EP86478 221 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PRR20CP86479 221 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PRR20DP86480 221 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PRR20BP86481 221 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 PRR20AP86496 221 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 Q6P435 159 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 ZNF705AQ6ZN79 300 aaPredicted RBP9.04□□□□□ -0.96
RFPL3-201ENST00000249007 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 OVOL2Q9BRP0 275 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 CST11Q9H112 138 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 R4GMQ9 66 aa9.04□□□□□ -0.96
RFPL3-201ENST00000249007 DNAH17Q9UFH2 4485 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 TRAV18A0A075B6X5 111 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 DEGS1O15121 323 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 SFT2D2O95562 160 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 BPNT1O95861 308 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 MRPL3P09001 348 aaKnown RBP9.03□□□□□ -0.96
RFPL3-201ENST00000249007 C19orf54Q5BKX5 351 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 OR4B1Q8NGF8 309 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 OR4X1Q8NH49 305 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 RNF2Q99496 336 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 VPS25Q9BRG1 176 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 C20orf24Q9BUV8 137 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 WFDC10AQ9H1F0 79 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 GSKIPQ9P0R6 139 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 SMPXQ9UHP9 88 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 SLC45A2Q9UMX9 530 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 TMEM14AQ9Y6G1 99 aa9.03□□□□□ -0.96
RFPL3-201ENST00000249007 TRAV1-1A0A0B4J248 108 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 IGKV1-12A0A0C4DH73 117 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 A0A1B0GU03 582 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 AGPAT2O15120 278 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 CCL25O15444 150 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 IGKV1D-12P01611 117 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 ESDP10768 282 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 RPL12P30050 165 aaKnown RBP9.02□□□□□ -0.96
RFPL3-201ENST00000249007 TPPP2P59282 170 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 HOGA1Q86XE5 327 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 LINC00311Q8N616 119 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 TCTEX1D1Q8N7M0 179 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 OR5B3Q8NH48 314 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 RPUSD4Q96CM3 377 aaKnown RBP9.02□□□□□ -0.96
RFPL3-201ENST00000249007 PARD6GQ9BYG4 376 aaPredicted RBP9.02□□□□□ -0.96
RFPL3-201ENST00000249007 OR2S2Q9NQN1 319 aa9.02□□□□□ -0.96
RFPL3-201ENST00000249007 ST3GAL6Q9Y274 331 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms